FastQCFastQC Report
Wed 23 Mar 2022
HMYYNDRXY_l02_n01_RS157.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMYYNDRXY_l02_n01_RS157.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7977745
Sequences flagged as poor quality0
Sequence length101
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC339410.42544603769611594No Hit
CTAATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATC163530.20498273634968278No Hit
AATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGT93760.11752694527087543No Hit
TTATCCTATACGACACACCCAGTCTTGTAAAGCTGGGACCCACATCACAC92740.11624838848571871No Hit
TGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGTTA91810.11508264553454642No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)