FastQCFastQC Report
Wed 23 Mar 2022
HMYYNDRXY_l01_n01_RS71J2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMYYNDRXY_l01_n01_RS71J2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9465531
Sequences flagged as poor quality0
Sequence length101
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC621200.6562759130998568No Hit
CTAATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATC207570.21929039163254552No Hit
TGGTGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC172820.18257824098827632No Hit
TTGTGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC172470.18220847831991674No Hit
TGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGTTA129980.13731929038106788No Hit
GGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC112850.119222048926785No Hit
AATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGT110720.11697177897362547No Hit
TGATGGTATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC107930.1140242422744165No Hit
CGGGGTTAAAATAATTTCTAGCTAATGTATATATATATTGATGATATATG96180.10161078126520319No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)