FastQCFastQC Report
Wed 23 Mar 2022
HMYYNDRXY_l01_n01_RS146J2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMYYNDRXY_l01_n01_RS146J2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23701465
Sequences flagged as poor quality0
Sequence length101
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC927470.3913133639629449No Hit
CTAATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATC543790.22943307512847833No Hit
AATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGT298820.12607659484339892No Hit
TGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGTTA293860.12398389719791582No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)