FastQCFastQC Report
Wed 23 Mar 2022
HMYYNDRXY_l01_n01_RS138J2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMYYNDRXY_l01_n01_RS138J2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10298495
Sequences flagged as poor quality0
Sequence length101
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC492930.47864275314014326No Hit
CTAATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATC295230.28667295561147527No Hit
AATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGT155390.15088612462306386No Hit
TGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGTTA151540.14714771430194412No Hit
TTATCCTATACGACACACCCAGTCTTGTAAAGCTGGGACCCACATCACAC133510.12964030181108988No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)