FastQCFastQC Report
Wed 23 Mar 2022
HMYYNDRXY_l01_n01_RS137J2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMYYNDRXY_l01_n01_RS137J2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10074726
Sequences flagged as poor quality0
Sequence length101
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC583460.5791323754115001No Hit
CTAATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATC323840.32143802223504636No Hit
AATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGT164050.16283321253600347No Hit
TGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGTTA158580.15740378448009404No Hit
TTATCCTATACGACACACCCAGTCTTGTAAAGCTGGGACCCACATCACAC153600.15246072200871766No Hit
TTGTGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC115490.11463339052595574No Hit
TGGTGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC105920.10513437288517823No Hit
GGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC101400.10064789851356752No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)