FastQCFastQC Report
Wed 23 Mar 2022
HMYYNDRXY_l01_n01_RS110J2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMYYNDRXY_l01_n01_RS110J2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8678774
Sequences flagged as poor quality0
Sequence length101
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC838760.9664498695322635No Hit
CTAATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATC314480.3623553280682272No Hit
TTGTGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC236840.272895687801065No Hit
TGGTGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC226570.2610622191567611No Hit
TGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGTTA212540.24489634134959615No Hit
AATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGT173150.19950974642270902No Hit
GGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC155970.1797143237051685No Hit
TGATGGTATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC148090.17063470024683208No Hit
CGGGGTTAAAATAATTTCTAGCTAATGTATATATATATTGATGATATATG146020.16824957073429955No Hit
GTGTTGTAAAGTACAGAGAAGTTATTGAAGACCCCTCGGGGTTAAAATAA145640.16781172087209553No Hit
GTCTTGTAAAGCTGGGACCCACATCACACATCAGGAAGTTGAAACCAATG133280.1535700779856694No Hit
TTATCCTATACGACACACCCAGTCTTGTAAAGCTGGGACCCACATCACAC132530.15270590062605616No Hit
TGAGGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC106540.12275927452425883No Hit
TTGATGTATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC106040.12218315628451668No Hit
TGTTGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC98500.11349529322920496No Hit
GGTTGGTACTTACCTACTGTGTATCTCAAGTGTGGGGTAATAGAGTATAA95240.10973900230608609No Hit
AGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC94680.10909374987757488No Hit
TTATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC87290.10057872229418578No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)