HMYHGBBXX_l06n02_las50.352000000b734c.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMYHGBBXX_l06n02_las50.352000000b734c.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	9950462
Sequences flagged as poor quality	0
Sequence length	76
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	362349	3.6415294083832492	Illumina Single End PCR Primer 1 (100% over 50bp)
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT	34306	0.3447679112788934	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCCGTAT	44585	59.444363	47
CGCCGTA	44590	59.42806	46
GGTCGCC	44840	59.28433	43
TGGTCGC	44970	59.198853	42
GTGGTCG	45340	58.731194	41
GTCGCCG	45145	58.62024	44
CCGTATC	45290	58.53419	48
CGTATCA	45425	58.429573	49
TCGCCGT	45160	58.39036	45
CGGTGGT	46205	57.692287	39
CTCGGTG	46365	57.64416	37
GGTGGTC	46250	57.613167	40
GATCTCG	46925	57.04372	34
ATCTCGG	46985	56.933636	35
TCGGTGG	47080	56.93226	38
GTATCAT	46740	56.851368	50
TCTCGGT	47215	56.66399	36
AGATCTC	48035	55.712658	33
TAGATCT	48840	54.870995	32
AGTGTAG	49210	54.063454	28