HMYHGBBXX_l06n01_mrp83.351000000b7141.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMYHGBBXX_l06n01_mrp83.351000000b7141.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12041996
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGATCTCGTATGC	236821	1.9666257985802353	TruSeq Adapter, Index 5 (100% over 50bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACAGTGAGCTCGTATGC	14501	0.12042023598081249	TruSeq Adapter, Index 5 (98% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTCGTAT	34175	60.68761	42
GATCTCG	29970	59.91718	39
TCGTATG	35150	59.561825	43
CACACAG	34665	59.471992	31
GTATGCC	35265	59.222168	45
CGTATGC	35495	59.022343	44
TATGCCG	35590	58.749966	46
GTCACAC	35195	58.382603	29
TCTCGTA	30915	58.279552	41
TCACACA	35475	57.93623	30
CACAGTG	35665	57.853546	33
ATCTCGT	31385	57.216274	40
AGTCACA	36165	57.07443	28
ATGCCGT	35975	56.896553	47
GTGATCT	31450	56.8899	37
ACACAGT	36495	56.6337	32
TGATCTC	31700	56.573967	38
GCCGTCT	35940	56.08498	49
TGCCGTC	36345	56.008934	48
CCGTCTT	36280	55.427307	50