HMYHGBBXX_l05n02_las64.352000000b71c4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMYHGBBXX_l05n02_las64.352000000b71c4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22496276
Sequences flagged as poor quality	0
Sequence length	76
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	2424539	10.777512686988725	Illumina Single End PCR Primer 1 (100% over 50bp)
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT	622234	2.765942238617627	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GATCGGA	305160	61.131733	1
GCCGTAT	334800	53.771683	47
CGCCGTA	336230	53.771507	46
CCGTATC	336330	53.58123	48
CGTATCA	336230	53.49982	49
TCGCCGT	337235	53.445786	45
GTAGGGA	343395	53.239296	18
GTATCAT	337770	53.083633	50
GTCGCCG	341555	53.007988	44
TAGGGAA	344670	53.00574	19
GGTCGCC	343335	52.941807	43
TGTAGGG	345320	52.869614	17
GTGTAGG	346820	52.86007	16
CGTGTAG	346560	52.849865	15
TGGTCGC	343535	52.822582	42
GGGAAAG	344775	52.601124	21
GTGGTCG	345030	52.530323	41
CGTCGTG	351405	52.41704	12
GCGTCGT	351780	52.399055	11
CTCGGTG	346825	52.370296	37