HMYHGBBXX_l05n02_las57.352000000b7124.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMYHGBBXX_l05n02_las57.352000000b7124.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23953629
Sequences flagged as poor quality	0
Sequence length	76
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	121672	0.507948085862063	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCCGTA	17540	53.27292	46
GCCGTAT	17595	53.11042	47
GGTCGCC	17990	52.01505	43
TGGTCGC	18550	50.31356	42
GTCGCCG	19460	48.095665	44
CCGTATC	19890	47.123436	48
CGTATCA	20255	46.288254	49
TCGCCGT	20200	46.176815	45
GTGGTCG	20730	45.073486	41
CTCGGTG	22275	42.153732	37
CGGTGGT	22640	41.42615	39
GTAGGGA	22980	41.1989	18
GATCTCG	23220	40.772305	34
GGTGGTC	23175	40.52941	40
ATCTCGG	23530	40.195774	35
GTATCAT	23750	39.625034	50
GAGTGTA	24115	39.20314	27
TCGGTGG	24070	39.15544	38
TCTCGGT	24215	38.87765	36
AGTGTAG	24985	37.837574	28