HMYHGBBXX_l04n02_las60.352000000b71ee.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMYHGBBXX_l04n02_las60.352000000b71ee.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	27576294
Sequences flagged as poor quality	0
Sequence length	76
%GC	37

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	502708	1.8229715711618102	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCCGTAT	59830	62.744366	47
CGCCGTA	59990	62.727158	46
GGTCGCC	60075	62.48791	43
TGGTCGC	60330	62.097527	42
GTGGTCG	61375	61.157192	41
GTCGCCG	62135	60.455635	44
CCGTATC	62445	60.16858	48
CGTATCA	62520	60.096214	49
TCGCCGT	62335	60.010086	45
CTCGGTG	63455	59.360954	37
CGGTGGT	63375	59.00608	39
GGTGGTC	64390	58.170677	40
ATCTCGG	65490	57.78237	35
GATCTCG	65995	57.383045	34
TCGGTGG	65810	57.2847	38
TCTCGGT	66215	56.919292	36
GTATCAT	67160	56.164917	50
AGATCTC	69030	54.806442	33
GAGTGTA	69195	54.56636	27
AGTGTAG	69750	54.142216	28