HMYHGBBXX_l04n02_las56.352000000b7181.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMYHGBBXX_l04n02_las56.352000000b7181.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25168232
Sequences flagged as poor quality	0
Sequence length	76
%GC	37

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG	379888	1.5093948593608006	Illumina Single End PCR Primer 1 (100% over 50bp)
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCGT	368316	1.4634162622150018	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTGCGG	4730	39.65234	11
TGGTGCG	5330	34.92606	10
GGTCGCC	88730	33.805443	42
TGGTCGC	88760	33.749165	41
CGCCGTA	86705	33.501755	46
GCCGTAT	86405	33.462944	47
GTGGTCG	89825	33.389244	40
TGCGGAC	5510	33.349506	13
GTCGCCG	90235	33.283344	43
CTCGGTG	92205	32.854916	36
CGGTGGT	91400	32.80287	38
CCGTATC	88230	32.78736	48
GGTGGTC	91805	32.632053	39
CGTATCA	88700	32.59073	49
TCGCCGT	88445	32.433327	45
GATCTCG	93975	32.367794	33
TCGGTGG	94085	32.246197	37
ATCTCGG	94710	32.181274	34
TCTCGGT	94895	31.992252	35
AGATCTC	96850	31.505083	32