FastQCFastQC Report
Mon 9 May 2022
HMWN5BGXL_n01_aBZIP1y11_3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMWN5BGXL_n01_aBZIP1y11_3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7928106
Sequences flagged as poor quality0
Sequence length76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAA218290.27533688373995No Hit
CAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTA171070.21577663063536232No Hit
GCGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGT112600.14202635534893202No Hit
CGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAG96210.12135306969911855No Hit
TAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTAGT88200.11124977390564655No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)