FastQCFastQC Report
Mon 9 May 2022
HMWN5BGXL_n01_aBZIP1_GR_3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMWN5BGXL_n01_aBZIP1_GR_3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3553789
Sequences flagged as poor quality0
Sequence length76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAACCATAAACGATGCCGACCAGGGATCAGCGGATGTTGCTTATAGGACT69300.1950031360893964No Hit
GCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAA57030.16047660679910936No Hit
CATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGA56540.159097796745952No Hit
TTATCATATAATTTCTGTTGAATTACGTTAAGCATGTAATAATTAACATG55920.1573531799439978No Hit
CAAGGCTAAATACGGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGTA37590.1057744283636423No Hit
GTTGCTTATAGGACTCCGCTGGCACCTTATGAGAAATCAAAGTTTTTGGG37400.10523978773078536No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)