FastQCFastQC Report
Wed 7 Dec 2022
HMTK2DRX2_n02_br210.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMTK2DRX2_n02_br210.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length151
%GC67

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATTTTCTCCCATACATCGCACCTCATTCACACAGTAACTCCAAACCCC16.25No Hit
CCGGGCGGGGCCGGTAGTGTCGTAGGCGGGGGGGGGGGGGGGGGTGGTTN16.25No Hit
CGGGTTCCGCCTTGATGACGCCCCTCCCGTCTGGGTCGCCGCGCCCGGGC16.25No Hit
GGGGGGGCGGGGGGGGGGGGGGCGGGGGCGGGGGGGGCGGGGGGTGGGGC16.25No Hit
GATTGAGGTACCTCAAGTTGTCGGGATTCCCAGTCCAGCGGTGCTAGTTC16.25No Hit
TCGAGTGGCGGGGTGGCGGCGCGGAGGGTGGGCGGTGGGGGGGGGGGGGG16.25No Hit
ACAGATCTGCCCCGGCGGGGGGCCCGCTAGATCGCGCTCATCGGGCCCCG16.25No Hit
TTGCCCGGTGAGGGGTGGTGCTGCGTGGTCGGGGAGTGACGGGGGGCGAG16.25No Hit
ACGAATATTCTACGTCGGCAGTTGCGTCTTCGCTCGGGCCCGCCACAGCN16.25No Hit
TATGGGCATAAGTCTTTTCAACATAGAAACAAGTTATGTTAAGTACTTGA16.25No Hit
GGCGCGGTGTAAGAGTGTGGTGGACCCTGGTGCGCGGAGGGCGGGCTTGC16.25No Hit
AAGTCACGGTTAGTTTTTGTGCATCAACATTGGCTTAGGACCCGGCGTAG16.25No Hit
ACGCAGGGCGCCTGGCGGCGGGGCTTTGTGCGACACTTGGCGGGGGAGTG16.25No Hit
TGATTGTGGCCTTGTGTGTTTGGCCGCGAAGTCGTGCTTGGTGGGGTGGG16.25No Hit
TCGTTGGTGCGGTGGGGGGGTGGGGGGGGGGGGGGGTGTGTGGGGGGTGN16.25No Hit
GCTTCTTTACCGGGTTAGTTTGTAGTGTATGTCTCGTTCTGGTGGGAGTA16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)