FastQCFastQC Report
Wed 7 Dec 2022
HMTK2DRX2_n02_br192.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMTK2DRX2_n02_br192.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7
Sequences flagged as poor quality0
Sequence length151
%GC78

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCAGTCTCAAACCGTCAAAACGAAACCACACCCACACGACCAAGGGTG114.285714285714285No Hit
GGGGAGTGGGGTGGCCGCTGGGGTGGTGGTGTTGGTTGGGGGGGGGTGGG114.285714285714285No Hit
AGGGGGCCGGTGGCGCCACACCGGCCCTGAAGCGTATAGCGCCCGCTGGT114.285714285714285No Hit
GACGCGGCGGGCGGGCTGCGGCGGGCGCGCATGTGCGGCGGGGGCCGGGG114.285714285714285No Hit
CGGGGNTGGGGGGNGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGG114.285714285714285No Hit
CTTGGGGCTTACGGGTATTCTGGTAGTGGGCTTGTAGCTCGCCGGGGGAC114.285714285714285No Hit
AACGGAGTAAGGCTAGGACCAGTCCGGCCCGGGAGGCGGGATGGGGCGCC114.285714285714285No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)