FastQCFastQC Report
Wed 7 Dec 2022
HMTK2DRX2_n02_br181.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMTK2DRX2_n02_br181.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73
Sequences flagged as poor quality0
Sequence length151
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAACTGTTGCAGGCCTCCCTGAACCTCCACACCAGAATCCTCCCCCCGCC11.36986301369863No Hit
CGGCGGCACCGCCTTGGGGTTCGGGGAAATCCCTTGATGGCTTGATTCGC11.36986301369863No Hit
AGGGAGACTGCCGCGCCCGGGCCGAGACTCCGCGGCTTGACACACAACGT11.36986301369863No Hit
GGTGGGGGGGTGGGTGGCGGTTTGGTGGGTCGGCGGTCGGCTGGTCTGTG11.36986301369863No Hit
ACGTGGCCGCGTAGTCTTTGCTCCGCCCTGCTAGTCGACTTATCGCGAGA11.36986301369863No Hit
GATATGCGCTACAATTAATGACACCGTTTATGTTTCCCTGGGAAATTCTA11.36986301369863No Hit
CGCGACGCTGTTGGTTTTGAATTGTGGTGATTTACCGTTTCGGTCGCGGT11.36986301369863No Hit
CTTGTGGGTCTGGTGAGTCCTTTAGTGTGCATAGGTGCGGGGGAGTGTTC11.36986301369863No Hit
GATCTTTCGCTTGAGCTTTTGCGGTGCTGTCAAGGGTGTGTCATCTTATG11.36986301369863No Hit
ATACCTTACTTGTTAAGTATTGAATGTGAAAGCCTAGAATCCACAATCAG11.36986301369863No Hit
CGGGCGGGGTTGCGGGTTGGGTGTGTCCCGCGGGCTCCGGGTGCGCTAGG11.36986301369863No Hit
TGGGCGCTGTGGTGTGCTCCTAGGCGGGGCTCTGGGTGGGTGCGCGGCTA11.36986301369863No Hit
TAGCCTTCGAGGGGCGGGGGGCATTTAGCTGCGGTAACAATCTCCTGCTA11.36986301369863No Hit
TGCGGGCCCGCTACTAGCCCCGGGCCGTGCGGTGGGGGGGGCGGGCGGGC11.36986301369863No Hit
CGACCCCGGGTGTTAAGAATTGTGCGGCCCGTGTTACCGTGTCTTATGTA11.36986301369863No Hit
ATTGGCTAGATCATTTATTTATGTGTCACCGCTTATTTTAAACAAATTGT11.36986301369863No Hit
TTAGGCCCGAACGGTACACGCCCCCGCTTCATGATATGTCTGCGCCAGTC11.36986301369863No Hit
ACATGTTTATAGTTACGATATTAAATAAAATATAACAATAATTTTGTAAT11.36986301369863No Hit
TATTAATTTCACTTACATTAATATTCCGCTCAGAGCGGTCAACACACAAG11.36986301369863No Hit
ATATTCGGTGAGTTAGAAGGTGGGATGGTCGTGGCAGGTGGGGGTCATAC11.36986301369863No Hit
CTAGCCCGTAGAAAAGCCACACCCCCCGTAACGAAACAGATCGTACCATC11.36986301369863No Hit
AAAGGGGCACAGGGTTGATGGCGCTACTGGAGCGTACGGGTGTGCCGCGT11.36986301369863No Hit
CGTCGCCCACGCCAGTTCGCGCGACCTTTCCTGGCAGCGGGGTGGCGGGC11.36986301369863No Hit
TCTGTGCGGTACCGGTATGTTTTTTTCTTTATTTTTCCGGTGTTTGAAAC11.36986301369863No Hit
TACCGAGAGTGCTGTGCTAGGTGCGAGCGGGTTTCTAGGATCCCCCGGGC11.36986301369863No Hit
CAGCCGACGAAGTCGTAACCGCCAATACTACATCGGCTTGTGCCCATCCC11.36986301369863No Hit
AGTATGGTCTGGGCCTGGGCCCAGCGTGAGCCGGCGTGCGCGTGACGGTG11.36986301369863No Hit
ACGGGGGGCGCTGTTGGGGTGGGTGAGGCGGCCGCGGCGCGTGTGGGGGG11.36986301369863No Hit
CACTTATACTCATGTAGGTATACGCTCGAGCCGGCTTTCCTCCCATGTCA11.36986301369863No Hit
AGTGACACAATAACAGAAAATTCAACAAAGAAAGATAAAATAGATTACAT11.36986301369863No Hit
ACGAAGCCTAGTCATAGTTCGGATTGGTGCCGGGAAATCACATACGCGGT11.36986301369863No Hit
CCGGCTTGGGCGCCCGTGGGGCCCCCGGCGGCGGGGGCTCCGGGGGGGGG11.36986301369863No Hit
GGCGAGGTAGTCCGATCTACTTCTAAATCTAGGTGATGGTCTCCTATTGT11.36986301369863No Hit
TAATTTAAAGATATAACTATAATTAAATAAGTATCATTATATAAAATAAA11.36986301369863No Hit
CGGAACATGGCCACTTCTCAATTATGATTTTGTTTTCGTCCCGGTATCTG11.36986301369863No Hit
AGGGACGCTCCTCAGGCGCCACCTGCCTGGGGGGTGGCTCCCCCACTGCG11.36986301369863No Hit
CCGGGCTTAATTTAGTATCAGTAACAAGTCTGTGGTTCGAGTCGCGTCTG11.36986301369863No Hit
TGTCCCCGTCCGGTATTTGCATCGTGAGCCCCCCATCGCGCAGGGTGTTG11.36986301369863No Hit
TTAAATGTATCGCAGTGACCCTAATTCATGATCTATTGGAAGGTTAGGGC11.36986301369863No Hit
AACAATTATACTAAAATTTACTAAGCGTAACTTGTTGAGATTTACTAGCA11.36986301369863No Hit
CCCCCGGGCCAAGTTCCATTCCATGAATCCCACCTCATTTACCAGCATTA11.36986301369863No Hit
TTAACACATTTTATGTTGGAGTAAATTGGTGTTCTGCTTCGCGCTAATTA11.36986301369863No Hit
TTACAACCCGAATGAACTCCGTAACAACAAGAATTCTATATATATACATA11.36986301369863No Hit
GGGTGGTGTGTGGGGGGTGTTGGGGTGCTGCGGGTGTGGGGGTGGGTGGT11.36986301369863No Hit
ACCACGGTCCAATATTTACGTCCTTTTATGATTTTGGGAGTAAGGTGGTT11.36986301369863No Hit
GCACCGGTTCGTCGGTCGTAGTGCCTGGGGGATATGGTAATATTCTTTTA11.36986301369863No Hit
GCGGTCCCTGCGGTTTGAGCAGTCTGAGGCTCCGCCTCCGCGCCAATAGC11.36986301369863No Hit
AGGCGGTGTCGGCTATTCGGCAGGCCCAAGCCCACTCACTCCCTGGCGTC11.36986301369863No Hit
TTTTGCAGTGGGCCGGCGGGGCGCGCGGGGGCGGGCGGGGTGGTGGCGGG11.36986301369863No Hit
TTCTGCGCGCGAGGGGGCATTACTTTATGCGGAGGCAGGCTGTGGGGGTG11.36986301369863No Hit
ACGCTTGATTCGGTAGCCGTGTATCGACTTACCCGATGAAGCGTCATGTT11.36986301369863No Hit
CGATGTTGAGGCTGCGGAGGAGACTCTTTCTTTTGTCATATTTTGTGCCG11.36986301369863No Hit
GGCGCTAACGGTGGGTGGCTGGATCCGGTTCGGGGGTCGTGTGGGTGTCG11.36986301369863No Hit
GGGGGGGGGGGTGTGGCTTTTCTTCGTTTGTGGGGGTCGGGGTGCGATTT11.36986301369863No Hit
CTTGAAACTTCAATCAAGACCGCAAAAACTGTATATAAGCTTATGCGCTC11.36986301369863No Hit
AAATCTGACAGCCCAATATAACAACAAAATATAATTGTCTCAGGGGACGC11.36986301369863No Hit
TTCCATTGTTGCGAAAATAGCAAACCAGATCGACATTACAATAAAAAAAC11.36986301369863No Hit
GGAGCGCCGGGGCGGTTTCTGGTGGGGTATGGGGGGGGGGGTGGCTCGGT11.36986301369863No Hit
TGGATCGCGGAAGCCCGCCCGCCCCACGGCGGCGCCACACTGAGGCGCAC11.36986301369863No Hit
GTTTCCGGGGTATGCTTAGCCTGCGTTGTTGCCTTTAGTGTCGGTGGGAC11.36986301369863No Hit
TTCGGAGTCTGGCGTTTTTAGTTATTTCAGCTCAGAGATACCGTGGGCGT11.36986301369863No Hit
AGCTCAAAGAAGAAATAGCTAGGAATCAGCAGAGCCACCTTTAGACACGG11.36986301369863No Hit
ATTCCAGGGACGCCGCTAGCTGGCCCTCTGTTAGGCCAGCGGCCGCTCGC11.36986301369863No Hit
GACTCCTGGGGTTCTGGAGGGTTGGGAGTCTGTTGCTGCGCCCCACTAGT11.36986301369863No Hit
CCACGGTCCGACGCGGCGTCCGCCATCCATCCAGGGCCCANCCGCTCAGC11.36986301369863No Hit
CGCTGCGGGCGCGGCGGGTAGTTTTACCGGTGTATTTCTGGGGTGGTGTA11.36986301369863No Hit
ACCTGTCCTTTAAGGGCCCCGGCGGTGGGGTTTGTTGGGCCCGCCCTCAC11.36986301369863No Hit
CGGCGGGGCGGGGAGCTCCGCGTGGGGCGGGGGGCCCGTGAGTTTGGGGG11.36986301369863No Hit
TGGGGGGGGCGGGGGGGGGGGCGGGCGGGGGGGGGCGGTGGGGGGTGGGG11.36986301369863No Hit
GATGGATTCGCGGGGCTGGTGTGCTGTATGTCTGTGAGCTCCACTAGGTA11.36986301369863No Hit
TGACGCCCGCATGTTAGTCGCCCTAACCCCTTGGGCATCCCCGCGGGGCC11.36986301369863No Hit
CAACAATAACCATTAAATTCACACCACCCAACGACACACGAAACAAACAC11.36986301369863No Hit
GTATGGGGCAACAGGCAGAGACCACCCGGGTCTGGGGGGGGCTGGGTCGC11.36986301369863No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)