FastQCFastQC Report
Wed 7 Dec 2022
HMTK2DRX2_n01_br210.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMTK2DRX2_n01_br210.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length151
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTCCTTTTCCGATAATTGCAACTCGGGAGACCGCGGGGGCTGGTCCAA16.25No Hit
GGGGCTTAAACACCAGCAGAAGGCGGCTCGGCCCCCCACCCCCCCCCACG16.25No Hit
GGGGAAAATGCCAAAAAATGAAAATACACAACTATATAAATTCTAAATTA16.25No Hit
GGGCCAGTAACATAATTGTGGAAAACACCGTCCATTTTCGCGAGGAGAAA16.25No Hit
ACTGGAACAGCAACGCCAATGGCGGGGCACTCCAAGGGCGCTTACCGCTG16.25No Hit
GGGGGGAAGAGAGGTACTTGTCGGGCCGGCCAGGCGGCCGGGTCGCGCGG16.25No Hit
GGGTAAAAAAAATAAAAAATAAGTCGCTTCAGCCTGAATGGTGCGCTTCC16.25No Hit
GGGCATGAAAATACAATGGGTGGGTCGTGGTGCGGGGGGGGCGGGGGGCG16.25No Hit
GGGGGGGACTATGGCTACATTGGGGTGGCTGCGGGGCAGGTGTCGATTGT16.25No Hit
GGGGGGTGACAGGGGGGTTGAAGTATTCGGCCTTGTCGGTGCTGATGAGG16.25No Hit
GGACAAAAAATGGAAGGAATATACAAAAGGGAACTCTTACGCGCGCATGA16.25No Hit
GGGGGGCAATAGAGTGAGCGGGGGGTGATGTAGGCGAATATCTCTTGGGC16.25No Hit
GGGCAACCCTAAGCCGATCAACCTGTGTCGTCACCGTCTTGATGCGCGTA16.25No Hit
GGGGGGAAAATATCCATAAATAACGCCATACTCATCTCCATCACACCTAG16.25No Hit
TGTAATTTTCGGAAAAGGAGGCCGCCGCCGCCGACAGGTATATGAGTAAC16.25No Hit
GGGTCAACAAAGAATAACACACTTAATATAATTCACATAGAGTCGACCAT16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)