HMT3KBGX7_n02_QG3479.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMT3KBGX7_n02_QG3479.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2971542
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGGG	196218	6.603238318691104	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	45964	1.5468063382580493	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGGGGGGGGGGGGGGGGGGGG	13564	0.45646334462040244	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGCG	8167	0.2748404700320574	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGG	6941	0.2335824295937934	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTGGGGGGGGGGG	5146	0.1731760816438065	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGGTTA	15375	68.542946	53
GGGTTAA	15520	68.532845	54
GGTTAAA	15630	68.34393	55
GGGGGTT	16870	66.44654	52
TTGGGGG	28940	64.792816	39
GTTAAAA	16905	64.78246	56
TTTGGGG	28865	64.54218	38
TGGGGGG	31245	61.580273	40
TTTTGGG	30200	60.738586	37
GGGGGGT	20045	59.924026	51
AGGGGGG	36165	58.51422	70
GGCCGGG	3145	57.537586	47
GGGCCGG	3190	57.051247	46
GGGGCCG	3240	57.035954	45
GCCGGGG	3190	56.069492	48
TTTTTGG	33080	55.47391	36
CCGGGGA	2110	54.90324	49
AAGGGGG	39470	53.50815	69
AAAGGGG	39575	53.26544	68
AAAAGGG	40470	52.094357	67