HMT3KBGX7_n02_QG3465.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMT3KBGX7_n02_QG3465.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3105788
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGGG	186322	5.999186035878817	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	50573	1.6283468156873555	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGGGGGGGGGGGGGGGGGGGG	13179	0.42433675447261693	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGCC	12212	0.39320133891946263	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTGGGGGGGGGGG	8904	0.28669052749253976	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGG	5300	0.17064912350746414	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGTTTTTTTTTGGGGGGGGGG	3815	0.12283517097754258	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGCG	3496	0.11256402561926314	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGTTAA	14885	68.58413	54
GGGGTTA	14825	68.13099	53
GGTTAAA	15155	67.84719	55
GGGGGTT	16550	65.1523	52
GTTAAAA	16150	64.924	56
TTTGGGG	28255	61.68817	38
TTGGGGG	28525	61.611763	39
AGGGGGG	34490	59.38517	70
TTTTGGG	29800	57.67656	37
TGGGGGG	31435	57.47826	40
GGGGGGT	20000	57.17105	51
GGGGCCG	3025	56.115185	45
GGGCCGG	3095	54.166637	46
AAGGGGG	37735	53.905567	69
AAAGGGG	37750	53.714027	68
GGCCGGG	3090	53.34816	47
GCCGGGG	3110	52.55918	48
AAAAGGG	38840	52.196747	67
TTTTTGG	33060	51.84147	36
CCGGGGA	2030	50.170334	49