HMT3KBGX7_n02_QG3417.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMT3KBGX7_n02_QG3417.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1437892
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGGG	132687	9.227883596264531	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	33320	2.3172811309889756	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGGGGGGGGGGGGGGGGGGGG	8986	0.6249426243417447	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGCC	8257	0.5742434063198071	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTGGGGGGGGGGG	4369	0.30384757686947284	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGG	4200	0.2920942602086944	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGCG	4151	0.288686493839593	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGTTTTTTTTTGGGGGGGGGG	1646	0.11447313150083595	No Hit

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGGTTA	10325	69.17839	53
GGGTTAA	10485	69.12405	54
GGTTAAA	10670	68.51592	55
GTTAAAA	11190	66.61655	56
GGGGGTT	11475	66.08586	52
TTTGGGG	19470	64.19286	38
TTGGGGG	19610	63.910828	39
TTTTGGG	20265	60.864952	37
TGGGGGG	21455	60.144005	40
AGGGGGG	23815	59.83339	70
GGGGGGT	13620	59.043934	51
GGGCCGG	1950	58.506012	46
CCGGGGA	1360	58.406216	49
GGGGCCG	2025	57.203217	45
GGCCGGG	2000	57.041374	47
TTTTTGG	21690	56.749306	36
GCCGGGG	2030	55.16599	48
AAGGGGG	25915	54.604763	69
AAAGGGG	25865	54.594234	68
GGTTTAA	900	53.66042	55