HMT3KBGX7_n02_QG3374.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMT3KBGX7_n02_QG3374.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2169389
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGGG	209602	9.6617987829753	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	51753	2.3856025821095246	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGCC	13209	0.6088811181397158	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGGGGGGGGGGGGGGGGGGGG	12988	0.5986939179649201	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGCG	8866	0.4086865011300417	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGG	7707	0.3552613201228549	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTGGGGGGGGGGG	5350	0.24661321690116433	No Hit
GGGGGGGGGGGCGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGGG	2508	0.11560858840899443	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGTTAA	16060	69.08375	54
GGGGTTA	15945	68.83729	53
GGTTAAA	16235	68.55308	55
GGGGGTT	17425	66.785324	52
GTTAAAA	17235	66.37977	56
TTTGGGG	30570	65.08501	38
TTGGGGG	30820	64.95009	39
TTTTGGG	31300	62.525543	37
GGCCGGG	3265	61.96507	47
GGGCCGG	3400	61.150467	46
TGGGGGG	34020	60.486908	40
GGGGCCG	3490	60.37725	45
GCCGGGG	3330	60.3323	48
GGGGGGT	20950	59.927975	51
AGGGGGG	37890	59.391064	70
TTTTTGG	33485	58.46612	36
CCGGGGA	2320	58.38553	49
GGGCCCC	820	55.90097	9
GGTTTAA	1290	53.99027	55
AAAGGGG	41395	53.92286	68