HMT3KBGX7_n02_QG3348.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMT3KBGX7_n02_QG3348.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1604315
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGGG	157228	9.800319762640129	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	38189	2.380392877957259	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGGGGGGGGGGGGGGGGGGGG	10792	0.6726858503473445	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGCC	9481	0.5909687312030368	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGCG	5841	0.3640806200777279	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGG	5371	0.3347846277071523	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTGGGGGGGGGGG	4556	0.283984130298601	No Hit
GGGGGGGGGGGCGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGGG	1835	0.11437903404256644	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGTTAA	11900	69.309044	54
GGTTAAA	12080	68.7258	55
GGGGTTA	11790	68.70913	53
GGGGGTT	13010	66.86325	52
GTTAAAA	12720	66.39606	56
TTTGGGG	22800	65.000275	38
TTGGGGG	22960	64.93963	39
TTTTGGG	23455	62.185234	37
TGGGGGG	25015	61.031956	40
GGGCCGG	2480	60.962605	46
GGGGCCG	2555	60.13192	45
GGCCGGG	2475	60.095947	47
GCCGGGG	2460	59.4721	48
GGGGGGT	15645	59.2512	51
CCGGGGA	1590	58.76496	49
AGGGGGG	28880	58.607437	70
TTTTTGG	24990	58.18837	36
GGGTTTA	1135	54.26178	54
AAGGGGG	31185	53.87592	69
AAAGGGG	31355	53.4917	68