HMT3KBGX7_n02_QG3336.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMT3KBGX7_n02_QG3336.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2748969
Sequences flagged as poor quality	0
Sequence length	76
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGGG	123284	4.484735913718925	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	30217	1.0992121046108558	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGGGGGGGGGGGGGGGGGGGG	8080	0.2939283782392599	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGCC	7366	0.2679550042215827	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGCG	5365	0.19516407787792442	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGG	4526	0.164643544543427	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTGGGGGGGGGGG	2871	0.10443915518872711	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGTTAA	9660	67.678345	54
GGGGTTA	9570	67.61873	53
GGTTAAA	9825	66.79964	55
GGGGGTT	10645	64.89628	52
TTGGGGG	18580	63.48075	39
TTTGGGG	18665	62.7087	38
GTTAAAA	10745	62.252903	56
TGGGGGG	20035	60.737568	40
GGGGGGT	12425	59.857754	51
AGGGGGG	22835	58.48312	70
GGGGCCG	2040	57.30571	45
TTTTGGG	20250	57.14252	37
GGGCCGG	2125	55.341896	46
GGCCGGG	2060	53.860905	47
GCCGGGG	2055	53.656197	48
AAGGGGG	25250	52.77964	69
AAAGGGG	25510	52.17594	68
AAAAGGG	26490	50.137226	67
TTTTTGG	23140	49.879425	36
GGGGGCC	2400	48.562244	44