HMT3KBGX7_n02_QG3266.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMT3KBGX7_n02_QG3266.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1491423
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGGG	94695	6.349305327864731	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	23463	1.573195532052275	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAGGGGGGGGGGGGGGGGGGGG	6167	0.41349771325774104	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGCC	5660	0.37950333339367837	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTTGGGGGGGGCG	4515	0.30273101594919755	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGG	3628	0.24325761370181365	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGAAAAAATTTTTTTTGGGGGGGGGGG	2250	0.15086263253282267	No Hit

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGGTTAA	7165	69.07237	54
GGGGTTA	7165	68.33964	53
GGTTAAA	7370	67.592125	55
GGGGGTT	8040	65.209724	52
GTTAAAA	7970	64.65373	56
TTTGGGG	13825	64.33173	38
TTGGGGG	13970	64.108536	39
TGGGGGG	15345	60.439518	40
TTTTGGG	14675	59.605797	37
GGGGGGT	9480	59.398453	51
GGGCCGG	1565	57.69622	46
AGGGGGG	17655	57.641598	70
GGCCGGG	1555	56.49179	47
GCCGGGG	1560	55.862034	48
GGGGCCG	1620	55.741142	45
CCGGGGA	1120	54.05563	49
TTTTTGG	16320	53.67812	36
AAGGGGG	19110	52.957993	69
AAAGGGG	19190	52.52361	68
AAAAGGG	19600	51.294697	67