HMT3KBGX7_n01_QG3315.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMT3KBGX7_n01_QG3315.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2463678
Sequences flagged as poor quality	0
Sequence length	76
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGATAGCATCTCGTAT	271408	11.016374704811263	TruSeq Adapter, Index 15 (97% over 36bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATGCC	28510	67.99536	47
TATGCCG	28530	67.91502	48
CGTATGC	28540	67.89799	46
TCGTATG	28615	67.7431	45
ATGCCGT	28660	67.66268	49
TGCCGTC	28810	67.25101	50
CTGCTTG	28880	67.10953	59
TGCTTGA	28955	66.91953	60
CTCGTAT	28915	66.88291	44
GCCGTCT	29000	66.8359	51
CCGTCTT	29240	66.336555	52
TCTCGTA	29180	66.240875	43
ATCTCGT	29305	65.99147	42
TAGCATC	28990	65.9547	38
GCATCTC	29165	65.84161	40
GCTTGAA	29435	65.82827	61
TCTGCTT	29470	65.7924	58
CATCTCG	29465	65.41934	41
AGCATCT	29385	65.244125	39
ATAGCAT	29370	65.066925	37