[2023-08-24 17:04:42,492] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml
[2023-08-24 17:04:42,492] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml
[2023-08-24 17:04:42,492] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml
[2023-08-24 17:04:42,495] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml
[2023-08-24 17:04:42,495] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}}
[2023-08-24 17:04:42,495] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HMNY2BGXT/merged
[2023-08-24 17:04:42,657] multiqc [WARNING] MultiQC Version v1.15 now available!
[2023-08-24 17:04:42,658] multiqc [INFO ] This is MultiQC v1.9
[2023-08-24 17:04:42,658] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/hpcpipe/mqc_config.yaml /scratch/gencore/logs/html/HMNY2BGXT/merged
[2023-08-24 17:04:42,658] multiqc [DEBUG ] Working dir : /scratch/gencore/logs/html/HMNY2BGXT/merged
[2023-08-24 17:04:42,658] multiqc [INFO ] Template : default
[2023-08-24 17:04:42,658] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode]
[2023-08-24 17:04:42,658] multiqc [INFO ] Searching : /scratch/gencore/logs/html/HMNY2BGXT/merged
[2023-08-24 17:04:42,658] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean
[2023-08-24 17:04:42,658] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-36868050/tmpmgzp53_i
[2023-08-24 17:04:42,763] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_HW12_fastqc.html
[2023-08-24 17:04:42,766] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_HW12_fastqc.html
[2023-08-24 17:04:42,811] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_HW11_fastqc.html
[2023-08-24 17:04:42,813] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_HW11_fastqc.html
[2023-08-24 17:04:42,855] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO77_fastqc.html
[2023-08-24 17:04:42,856] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO77_fastqc.html
[2023-08-24 17:04:42,896] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2023-08-24 17:04:42,898] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: undetermined_barcodes.txt
[2023-08-24 17:04:43,068] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO73_fastqc.html
[2023-08-24 17:04:43,070] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO73_fastqc.html
[2023-08-24 17:04:43,114] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO78_fastqc.html
[2023-08-24 17:04:43,115] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO78_fastqc.html
[2023-08-24 17:04:43,156] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_undetermined_fastqc.html
[2023-08-24 17:04:43,158] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_undetermined_fastqc.html
[2023-08-24 17:04:43,200] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO80_fastqc.html
[2023-08-24 17:04:43,202] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO80_fastqc.html
[2023-08-24 17:04:43,243] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_HW13_fastqc.html
[2023-08-24 17:04:43,245] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_HW13_fastqc.html
[2023-08-24 17:04:43,286] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO69_fastqc.html
[2023-08-24 17:04:43,287] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO69_fastqc.html
[2023-08-24 17:04:43,330] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO79_fastqc.html
[2023-08-24 17:04:43,332] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO79_fastqc.html
[2023-08-24 17:04:43,374] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_HW10_fastqc.html
[2023-08-24 17:04:43,376] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_HW10_fastqc.html
[2023-08-24 17:04:43,417] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO71_fastqc.html
[2023-08-24 17:04:43,419] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO71_fastqc.html
[2023-08-24 17:04:43,461] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO68_fastqc.html
[2023-08-24 17:04:43,462] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO68_fastqc.html
[2023-08-24 17:04:43,504] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO70_fastqc.html
[2023-08-24 17:04:43,506] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO70_fastqc.html
[2023-08-24 17:04:43,549] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO76_fastqc.html
[2023-08-24 17:04:43,550] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO76_fastqc.html
[2023-08-24 17:04:43,593] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_YZ33_fastqc.html
[2023-08-24 17:04:43,594] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_YZ33_fastqc.html
[2023-08-24 17:04:43,637] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_JK203_fastqc.html
[2023-08-24 17:04:43,639] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_JK203_fastqc.html
[2023-08-24 17:04:43,681] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO66_fastqc.html
[2023-08-24 17:04:43,683] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO66_fastqc.html
[2023-08-24 17:04:43,725] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO74_fastqc.html
[2023-08-24 17:04:43,726] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO74_fastqc.html
[2023-08-24 17:04:43,768] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO72_fastqc.html
[2023-08-24 17:04:43,769] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO72_fastqc.html
[2023-08-24 17:04:43,810] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO75_fastqc.html
[2023-08-24 17:04:43,812] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO75_fastqc.html
[2023-08-24 17:04:43,854] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO67_fastqc.html
[2023-08-24 17:04:43,856] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO67_fastqc.html
[2023-08-24 17:04:43,896] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO65_fastqc.html
[2023-08-24 17:04:43,898] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO65_fastqc.html
[2023-08-24 17:04:43,940] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO81_fastqc.html
[2023-08-24 17:04:43,942] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HMNY2BGXT_n01_DO81_fastqc.html
[2023-08-24 17:04:44,406] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2
[2023-08-24 17:04:44,408] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2
[2023-08-24 17:04:44,425] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 24 samples (table)
[2023-08-24 17:04:44,427] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table)
[2023-08-24 17:04:44,437] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table)
[2023-08-24 17:04:44,441] multiqc [DEBUG ] No samples found: conpair
[2023-08-24 17:04:44,446] multiqc [DEBUG ] No samples found: peddy
[2023-08-24 17:04:44,451] multiqc [DEBUG ] No samples found: somalier
[2023-08-24 17:04:44,455] multiqc [DEBUG ] No samples found: methylQA
[2023-08-24 17:04:44,463] multiqc [DEBUG ] No samples found: mosdepth
[2023-08-24 17:04:44,467] multiqc [DEBUG ] No samples found: phantompeakqualtools
[2023-08-24 17:04:44,470] multiqc [DEBUG ] No samples found: qualimap
[2023-08-24 17:04:44,475] multiqc [DEBUG ] No samples found: preseq
[2023-08-24 17:04:44,480] multiqc [DEBUG ] No samples found: quast
[2023-08-24 17:04:44,485] multiqc [DEBUG ] No samples found: qorts
[2023-08-24 17:04:44,489] multiqc [DEBUG ] No samples found: rna_seqc
[2023-08-24 17:04:44,494] multiqc [DEBUG ] No samples found: rockhopper
[2023-08-24 17:04:44,499] multiqc [DEBUG ] No samples found: rsem
[2023-08-24 17:04:44,509] multiqc [DEBUG ] No samples found: rseqc
[2023-08-24 17:04:44,513] multiqc [DEBUG ] No samples found: busco
[2023-08-24 17:04:44,518] multiqc [DEBUG ] No samples found: goleft_indexcov
[2023-08-24 17:04:44,522] multiqc [DEBUG ] No samples found: disambiguate
[2023-08-24 17:04:44,527] multiqc [DEBUG ] No samples found: supernova
[2023-08-24 17:04:44,538] multiqc [DEBUG ] No samples found: deeptools
[2023-08-24 17:04:44,543] multiqc [DEBUG ] No samples found: sargasso
[2023-08-24 17:04:44,548] multiqc [DEBUG ] No samples found: verifybamid
[2023-08-24 17:04:44,552] multiqc [DEBUG ] No samples found: mirtrace
[2023-08-24 17:04:44,557] multiqc [DEBUG ] No samples found: happy
[2023-08-24 17:04:44,561] multiqc [DEBUG ] No samples found: mirtop
[2023-08-24 17:04:44,567] multiqc [DEBUG ] No samples found: homer
[2023-08-24 17:04:44,571] multiqc [DEBUG ] No samples found: macs2
[2023-08-24 17:04:44,575] multiqc [DEBUG ] No samples found: theta2
[2023-08-24 17:04:44,580] multiqc [DEBUG ] No samples found: snpeff
[2023-08-24 17:04:44,586] multiqc [DEBUG ] No samples found: gatk
[2023-08-24 17:04:44,590] multiqc [DEBUG ] No samples found: htseq
[2023-08-24 17:04:44,596] multiqc [DEBUG ] No samples found: bcftools
[2023-08-24 17:04:44,600] multiqc [DEBUG ] No samples found: featureCounts
[2023-08-24 17:04:44,606] multiqc [DEBUG ] No samples found: fgbio
[2023-08-24 17:04:44,617] multiqc [DEBUG ] No samples found: dragen
[2023-08-24 17:04:44,622] multiqc [DEBUG ] No samples found: dedup
[2023-08-24 17:04:44,626] multiqc [DEBUG ] No samples found: damageprofiler
[2023-08-24 17:04:44,648] multiqc [DEBUG ] No samples found: biobambam2
[2023-08-24 17:04:44,652] multiqc [DEBUG ] No samples found: mtnucratio
[2023-08-24 17:04:44,654] multiqc [DEBUG ] No samples found: picard
[2023-08-24 17:04:44,659] multiqc [DEBUG ] No samples found: prokka
[2023-08-24 17:04:44,663] multiqc [DEBUG ] No samples found: samblaster
[2023-08-24 17:04:44,671] multiqc [DEBUG ] No samples found: samtools
[2023-08-24 17:04:44,675] multiqc [DEBUG ] No samples found: sexdeterrmine
[2023-08-24 17:04:44,680] multiqc [DEBUG ] No samples found: bamtools
[2023-08-24 17:04:44,684] multiqc [DEBUG ] No samples found: jellyfish
[2023-08-24 17:04:44,691] multiqc [DEBUG ] No samples found: vcftools
[2023-08-24 17:04:44,695] multiqc [DEBUG ] No samples found: longranger
[2023-08-24 17:04:44,700] multiqc [DEBUG ] No samples found: stacks
[2023-08-24 17:04:44,704] multiqc [DEBUG ] No samples found: varscan2
[2023-08-24 17:04:44,716] multiqc [DEBUG ] No samples found: bbmap
[2023-08-24 17:04:44,721] multiqc [DEBUG ] No samples found: bismark
[2023-08-24 17:04:44,726] multiqc [DEBUG ] No samples found: biscuit
[2023-08-24 17:04:44,730] multiqc [DEBUG ] No samples found: hicexplorer
[2023-08-24 17:04:44,735] multiqc [DEBUG ] No samples found: hicup
[2023-08-24 17:04:44,739] multiqc [DEBUG ] No samples found: hicpro
[2023-08-24 17:04:44,743] multiqc [DEBUG ] No samples found: salmon
[2023-08-24 17:04:44,748] multiqc [DEBUG ] No samples found: kallisto
[2023-08-24 17:04:44,752] multiqc [DEBUG ] No samples found: slamdunk
[2023-08-24 17:04:44,757] multiqc [DEBUG ] No samples found: star
[2023-08-24 17:04:44,761] multiqc [DEBUG ] No samples found: hisat2
[2023-08-24 17:04:44,766] multiqc [DEBUG ] No samples found: tophat
[2023-08-24 17:04:44,770] multiqc [DEBUG ] No samples found: bowtie2
[2023-08-24 17:04:44,774] multiqc [DEBUG ] No samples found: bowtie1
[2023-08-24 17:04:44,780] multiqc [DEBUG ] No samples found: snpsplit
[2023-08-24 17:04:44,784] multiqc [DEBUG ] No samples found: kat
[2023-08-24 17:04:44,788] multiqc [DEBUG ] No samples found: leehom
[2023-08-24 17:04:44,792] multiqc [DEBUG ] No samples found: adapterRemoval
[2023-08-24 17:04:44,796] multiqc [DEBUG ] No samples found: clipandmerge
[2023-08-24 17:04:44,801] multiqc [DEBUG ] No samples found: cutadapt
[2023-08-24 17:04:44,805] multiqc [DEBUG ] No samples found: flexbar
[2023-08-24 17:04:44,809] multiqc [DEBUG ] No samples found: kaiju
[2023-08-24 17:04:44,813] multiqc [DEBUG ] No samples found: kraken
[2023-08-24 17:04:44,818] multiqc [DEBUG ] No samples found: malt
[2023-08-24 17:04:44,822] multiqc [DEBUG ] No samples found: trimmomatic
[2023-08-24 17:04:44,826] multiqc [DEBUG ] No samples found: sickle
[2023-08-24 17:04:44,831] multiqc [DEBUG ] No samples found: skewer
[2023-08-24 17:04:44,835] multiqc [DEBUG ] No samples found: sortmerna
[2023-08-24 17:04:44,839] multiqc [DEBUG ] No samples found: biobloomtools
[2023-08-24 17:04:44,844] multiqc [DEBUG ] No samples found: fastq_screen
[2023-08-24 17:04:44,848] multiqc [DEBUG ] No samples found: afterqc
[2023-08-24 17:04:44,853] multiqc [DEBUG ] No samples found: fastp
[2023-08-24 17:04:46,236] multiqc.modules.fastqc.fastqc [INFO ] Found 24 reports
[2023-08-24 17:04:46,746] multiqc [DEBUG ] No samples found: pycoqc
[2023-08-24 17:04:46,751] multiqc [DEBUG ] No samples found: minionqc
[2023-08-24 17:04:46,755] multiqc [DEBUG ] No samples found: multivcfanalyzer
[2023-08-24 17:04:46,760] multiqc [DEBUG ] No samples found: clusterflow
[2023-08-24 17:04:46,764] multiqc [DEBUG ] No samples found: bcl2fastq
[2023-08-24 17:04:46,769] multiqc [DEBUG ] No samples found: interop
[2023-08-24 17:04:46,773] multiqc [DEBUG ] No samples found: ivar
[2023-08-24 17:04:46,778] multiqc [DEBUG ] No samples found: flash
[2023-08-24 17:04:46,782] multiqc [DEBUG ] No samples found: seqyclean
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found.
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found.
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found.
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'.
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'.
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'.
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'.
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'.
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'.
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'.
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'.
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'.
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'.
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'.
[2023-08-24 17:04:46,782] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'.
[2023-08-24 17:04:46,783] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'.
[2023-08-24 17:04:46,812] multiqc [INFO ] Compressing plot data
[2023-08-24 17:04:47,137] multiqc [INFO ] Report : multiqc_report.html
[2023-08-24 17:04:47,137] multiqc [INFO ] Data : multiqc_data
[2023-08-24 17:04:47,137] multiqc [DEBUG ] Moving data file from '/state/partition1/job-36868050/tmpmgzp53_i/multiqc_data' to '/scratch/gencore/logs/html/HMNY2BGXT/merged/multiqc_data'
[2023-08-24 17:04:47,259] multiqc [INFO ] MultiQC complete