Sample Sequence length File type Filename per_base_sequence_quality Sequences flagged as poor quality Total Sequences kmer_content basic_statistics %GC per_sequence_quality_scores overrepresented_sequences sequence_length_distribution per_tile_sequence_quality per_base_n_content Encoding avg_sequence_length adapter_content sequence_duplication_levels total_deduplicated_percentage per_sequence_gc_content per_base_sequence_content HMNGTBGX2_n01_jes_009 75.0 Conventional base calls HMNGTBGX2_n01_jes_009.fastq.gz pass 0.0 12045782.0 fail pass 45.0 pass pass pass pass pass Sanger / Illumina 1.9 75.0 pass warn 55.3262229851016 pass fail HMNGTBGX2_n01_jes_010 75.0 Conventional base calls HMNGTBGX2_n01_jes_010.fastq.gz pass 0.0 10111308.0 fail pass 45.0 pass pass pass pass pass Sanger / Illumina 1.9 75.0 pass warn 60.055706774458116 pass fail HMNGTBGX2_n01_jes_117 75.0 Conventional base calls HMNGTBGX2_n01_jes_117.fastq.gz pass 0.0 13888921.0 fail pass 45.0 pass pass pass pass pass Sanger / Illumina 1.9 75.0 pass warn 53.52928055988908 pass fail HMNGTBGX2_n01_jes_119 75.0 Conventional base calls HMNGTBGX2_n01_jes_119.fastq.gz pass 0.0 18652992.0 fail pass 45.0 pass pass pass pass pass Sanger / Illumina 1.9 75.0 pass fail 49.07123685680293 pass fail HMNGTBGX2_n01_jes_120 75.0 Conventional base calls HMNGTBGX2_n01_jes_120.fastq.gz pass 0.0 9720950.0 fail pass 45.0 pass pass pass pass pass Sanger / Illumina 1.9 75.0 pass warn 58.934167357837495 pass fail HMNGTBGX2_n01_jes_130 75.0 Conventional base calls HMNGTBGX2_n01_jes_130.fastq.gz pass 0.0 12530105.0 fail pass 44.0 pass fail pass pass pass Sanger / Illumina 1.9 75.0 pass fail 13.472926705245916 warn fail HMNGTBGX2_n01_jes_131 75.0 Conventional base calls HMNGTBGX2_n01_jes_131.fastq.gz pass 0.0 12616010.0 fail pass 45.0 pass pass pass pass pass Sanger / Illumina 1.9 75.0 pass warn 55.25923579850725 pass fail HMNGTBGX2_n01_jes_132 75.0 Conventional base calls HMNGTBGX2_n01_jes_132.fastq.gz pass 0.0 13250008.0 fail pass 45.0 pass pass pass pass pass Sanger / Illumina 1.9 75.0 pass warn 54.06250157711011 pass fail HMNGTBGX2_n01_shrt_02g 75.0 Conventional base calls HMNGTBGX2_n01_shrt_02g.fastq.gz pass 0.0 50532694.0 fail pass 44.0 pass pass pass pass pass Sanger / Illumina 1.9 75.0 pass fail 31.698090648440193 warn fail HMNGTBGX2_n01_shrt_03g 75.0 Conventional base calls HMNGTBGX2_n01_shrt_03g.fastq.gz pass 0.0 90286416.0 fail pass 45.0 pass warn pass pass pass Sanger / Illumina 1.9 75.0 pass fail 25.823054406520622 warn fail HMNGTBGX2_n01_shrt_04g 75.0 Conventional base calls HMNGTBGX2_n01_shrt_04g.fastq.gz pass 0.0 15656877.0 fail pass 45.0 pass pass pass pass pass Sanger / Illumina 1.9 75.0 pass fail 41.436770387721936 warn fail HMNGTBGX2_n01_shrt_05g 75.0 Conventional base calls HMNGTBGX2_n01_shrt_05g.fastq.gz pass 0.0 11029532.0 fail pass 45.0 pass warn pass pass pass Sanger / Illumina 1.9 75.0 pass fail 42.52395396193643 warn fail HMNGTBGX2_n01_shrt_07g 75.0 Conventional base calls HMNGTBGX2_n01_shrt_07g.fastq.gz pass 0.0 24679085.0 fail pass 44.0 pass pass pass pass pass Sanger / Illumina 1.9 75.0 pass fail 41.656230060714336 warn fail HMNGTBGX2_n01_shrt_08g 75.0 Conventional base calls HMNGTBGX2_n01_shrt_08g.fastq.gz pass 0.0 23639112.0 fail pass 45.0 pass warn pass pass pass Sanger / Illumina 1.9 75.0 pass fail 39.8325539998165 warn fail HMNGTBGX2_n01_shrt_09g 75.0 Conventional base calls HMNGTBGX2_n01_shrt_09g.fastq.gz pass 0.0 12045736.0 fail pass 45.0 pass pass pass pass pass Sanger / Illumina 1.9 75.0 pass fail 44.49467887407431 warn fail HMNGTBGX2_n01_shrt_09r 75.0 Conventional base calls HMNGTBGX2_n01_shrt_09r.fastq.gz pass 0.0 12990706.0 fail pass 46.0 pass warn pass pass pass Sanger / Illumina 1.9 75.0 pass fail 34.78552404097165 fail fail HMNGTBGX2_n01_shrt_10g 75.0 Conventional base calls HMNGTBGX2_n01_shrt_10g.fastq.gz pass 0.0 13482829.0 fail pass 45.0 pass warn pass pass pass Sanger / Illumina 1.9 75.0 pass fail 37.656958605788034 warn fail HMNGTBGX2_n01_shrt_10r 75.0 Conventional base calls HMNGTBGX2_n01_shrt_10r.fastq.gz pass 0.0 12900265.0 fail pass 45.0 pass fail pass pass pass Sanger / Illumina 1.9 75.0 pass fail 14.310370529112387 fail fail HMNGTBGX2_n01_shrt_11r 75.0 Conventional base calls HMNGTBGX2_n01_shrt_11r.fastq.gz pass 0.0 13071178.0 fail pass 45.0 pass warn pass pass pass Sanger / Illumina 1.9 75.0 pass fail 44.326543512874004 warn fail HMNGTBGX2_n01_shrt_12g 75.0 Conventional base calls HMNGTBGX2_n01_shrt_12g.fastq.gz pass 0.0 11926701.0 fail pass 44.0 pass pass pass pass pass Sanger / Illumina 1.9 75.0 pass fail 49.45708258015548 warn fail HMNGTBGX2_n01_shrt_12r 75.0 Conventional base calls HMNGTBGX2_n01_shrt_12r.fastq.gz pass 0.0 12787557.0 fail pass 45.0 pass warn pass pass pass Sanger / Illumina 1.9 75.0 pass fail 45.2371584514663 warn fail HMNGTBGX2_n01_shrt_13g 75.0 Conventional base calls HMNGTBGX2_n01_shrt_13g.fastq.gz pass 0.0 8490997.0 fail pass 45.0 pass warn pass pass pass Sanger / Illumina 1.9 75.0 pass warn 52.16535375387069 warn fail HMNGTBGX2_n01_shrt_13r 75.0 Conventional base calls HMNGTBGX2_n01_shrt_13r.fastq.gz pass 0.0 18268626.0 fail pass 46.0 pass warn pass pass pass Sanger / Illumina 1.9 75.0 pass fail 38.606036877639525 fail fail HMNGTBGX2_n01_shrt_14g 75.0 Conventional base calls HMNGTBGX2_n01_shrt_14g.fastq.gz pass 0.0 11994544.0 fail pass 45.0 pass warn pass pass pass Sanger / Illumina 1.9 75.0 pass fail 41.46182151679211 warn fail HMNGTBGX2_n01_shrt_14r 75.0 Conventional base calls HMNGTBGX2_n01_shrt_14r.fastq.gz pass 0.0 13355648.0 fail pass 46.0 pass warn pass pass pass Sanger / Illumina 1.9 75.0 pass fail 33.125443919472104 fail fail HMNGTBGX2_n01_shrt_15r 75.0 Conventional base calls HMNGTBGX2_n01_shrt_15r.fastq.gz pass 0.0 19331761.0 fail pass 45.0 pass warn pass pass pass Sanger / Illumina 1.9 75.0 pass fail 28.207111083648744 warn fail