HMNGTBGX2_n01_shrt_14r.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMNGTBGX2_n01_shrt_14r.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13355648
Sequences flagged as poor quality	0
Sequence length	75
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGAGTTCATGCGCTTCAAGGTGCGCAT	32516	0.2434625410912297	No Hit
GCTGACTCTAGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATGGGTCGGGATCTGTACGACGATGAC	26681	0.19977315964002645	No Hit
ATCGATTCTAGCATGACTGGTGGACAGCAAATGGGTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCC	23118	0.1730953076930449	No Hit
CTGTTACTACCCTACACTCATACTTGGATCACAGCCACTAGTAGCCTATGCTCCTAGTACATAGACACCCTACAG	19210	0.14383427895074802	No Hit
AGCAGATCTATCGATTCTAGCATGACTGGTGGACAGCAAATGGGTCGGGATCTGTACGACGATGACGATAAGGAT	17224	0.12896416557249787	No Hit
GTCGGGATCTGTACGACGATGACGATAAGGATCCGATGGCCTCCTCCGAGGACGTCATCAAGGAGTTCATGCGCT	14268	0.10683120729147698	No Hit

Adapter graph

$Kmer graph$

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
ACTCTAG	11815	36.03497	5
GCTGACT	5650	35.490482	1
TACTCTA	6485	34.475018	4
CTAGTTG	6590	33.189026	8
ACTACCC	9195	33.09491	6
CTGTTAC	9420	32.498024	1
TCTAGTT	7595	30.205399	7
TACTACC	10030	30.133244	5
TACCCTA	10035	30.045868	8
CTCTAGT	7610	29.69621	6
GTTACTA	10325	29.505985	3
TGTACTC	7545	29.311516	2
TTGTACT	7590	28.692726	1
CTACCCT	10820	27.897898	7
TTACTAC	11030	27.557503	4
GTACTCT	8060	27.524244	3
TAGTTGT	8050	27.126799	9
GACTCTA	8145	26.093307	4
TGTTACT	11745	25.968016	2
GTTACCT	8295	25.869852	14