HMNG2BCX2_l01_n02_FluA_CM552916.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMNG2BCX2_l01_n02_FluA_CM552916.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1946080
Sequences flagged as poor quality	0
Sequence length	151
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCTCCTTTCCAGA	4155	0.2135061251336019	No Hit
TTATAATACACTGTAAGAGCAAGACCCCTTTCTGCTGGATTCTGATAAAA	2464	0.1266134999588917	No Hit
GAGTGAGACCCTGTCTCAAAAACAAGAAAGCTAAATTTGTGAACAGTTAA	2240	0.11510318178081065	No Hit
ATAATACACTGTAAGAGCAAGACCCCTTTCTGCTGGATTCTGATAAAAGA	2221	0.11412686014963414	No Hit
AGTAGAAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCTCCTTT	2192	0.1126366850283647	No Hit
ATGTACAGGTATCCTCAGGATTCCAGCCTGTCGGTTTAGGATGCTCGCAA	2133	0.10960494943681658	No Hit
GAGCAAAAGCAGGTGCTCTCCCAGCTGAGCTATGCCCCCATGTACAGGTA	2034	0.10451779988489682	No Hit
GTATCGGAAGGTGCGGCTGGATCACCTCCTTTCCAGAGCTTCTCGCAAAG	1985	0.10199991778344157	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGCGAA	730	0.0	108.25616	1
AGCGAAA	2380	0.0	95.34905	1
GCGAAAG	2620	0.0	87.163765	2
GAGCAAA	3610	0.0	78.9286	1
CGAAAGC	2940	0.0	77.42996	3
CAAAAGC	4625	0.0	60.506535	4
ACCGACC	60	6.808019E-6	60.41665	145
GGAGCGA	200	0.0	50.75129	1
GCAAAAG	5535	0.0	50.689735	3
AGCAAAA	5775	0.0	48.959763	2
ACGATCC	500	0.0	43.49999	145
AAAAGCA	6955	0.0	40.65315	5
ACGCAGT	165	1.36788E-9	39.544426	4
AAAGCAG	9440	0.0	38.245823	6
CCGGTCT	270	0.0	37.591618	3
CGAACCC	140	6.613918E-7	36.24999	145
GTAGCCG	1780	0.0	35.841766	8
TAGCCGT	1785	0.0	35.742287	9
GAAAGCA	6515	0.0	35.609203	4
GTACCGC	530	0.0	35.56511	5