HMNG2BCX2_l01_n02_FluA_CM550272.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMNG2BCX2_l01_n02_FluA_CM550272.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2004894
Sequences flagged as poor quality	0
Sequence length	151
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACACCATATAAGTGAGAAGTCAGGCTTTAAGCCAGGGAGAGACCTGCCCA	3867	0.19287802746678878	No Hit
ATATCGTGTAGAATTAGGCCTTCGTGGGCTTTGGAGCTGTGTTTGAATCC	3109	0.15507054238278933	No Hit
GAGCAAAAGCAGGTAGATATTGAAAGATGAGCCTTCTAACCGAGGTCGAA	2610	0.130181446001634	No Hit
GGACCAATACATGGGTACCACACTGGGTGCTGAGACTTGGCCTTCTTCAC	2590	0.1291838870284414	No Hit
GTATTACTAAGGGCTTTCACCGAAGAGGGAGCAATTGTTGGCGAAATCTC	2170	0.10823514859139687	No Hit
GAGCAAAAGCAGGTGGGGAGGTAAGAGAGGAGTAGGGGAGGGCCAGAGAC	2102	0.10484344808254203	No Hit
TTCTTAGACAGAACCCGACTGAAGAACAAGCTGTGGATATATGCAAGGCT	2101	0.1047935701338824	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGCGAA	1155	95.40845	1
GAGCAAA	5630	68.50598	1
GCAAAAG	5570	68.46298	3
CAAAAGC	5825	66.337105	4
AGCAAAA	5995	63.48854	2
CGAAAGC	1735	62.67827	4
AGCGAAA	1740	62.498165	2
GCGAAAG	1905	57.084934	3
AAAAGCA	7905	49.43245	5
AAAGCAG	10005	49.20145	6
AAGCAGG	10325	47.676563	7
ATATCGT	1195	46.10743	1
TATCGTG	1275	44.92025	2
TCGTGTA	1415	39.451138	4
TCGTACT	295	39.320877	2
ATCGTGT	1465	38.104683	3
AGCAGGG	3920	37.544476	8
TATAAGT	3190	37.271633	7
ATATAAG	3255	36.9728	6
AGCAGGA	3750	36.346504	8