Sample per_base_n_content basic_statistics total_deduplicated_percentage per_base_sequence_content sequence_length_distribution per_sequence_quality_scores sequence_duplication_levels kmer_content Filename overrepresented_sequences per_sequence_gc_content per_tile_sequence_quality %GC Sequence length File type Encoding Sequences flagged as poor quality adapter_content avg_sequence_length Total Sequences per_base_sequence_quality HMN35AFXX_n01_mah137 pass pass 76.22847451270569 fail pass pass pass fail HMN35AFXX_n01_mah137.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 2544403.0 pass HMN35AFXX_n01_mah148 pass pass 72.41529103497781 fail pass pass pass fail HMN35AFXX_n01_mah148.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3237213.0 pass HMN35AFXX_n01_mah33 pass pass 72.66117598426226 fail pass pass pass fail HMN35AFXX_n01_mah33.fastq.gz pass pass pass 42.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3125315.0 pass HMN35AFXX_n01_mah4 pass pass 71.56143106121966 fail pass pass pass fail HMN35AFXX_n01_mah4.fastq.gz pass pass pass 42.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3453253.0 pass HMN35AFXX_n01_mah58 pass pass 69.01152936767654 fail pass pass warn fail HMN35AFXX_n01_mah58.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3408567.0 pass HMN35AFXX_n01_mas4x58p110b pass pass 53.06353041495777 fail pass pass warn fail HMN35AFXX_n01_mas4x58p110b.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 7572942.0 pass HMN35AFXX_n01_mas4x58p111d pass pass 60.040276647097066 fail pass pass warn fail HMN35AFXX_n01_mas4x58p111d.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 6386017.0 pass HMN35AFXX_n01_mas4x58p112c pass pass 69.06563354467323 fail pass pass warn fail HMN35AFXX_n01_mas4x58p112c.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3235958.0 pass HMN35AFXX_n01_mas4x58p11d pass pass 73.42256035149383 fail pass pass pass fail HMN35AFXX_n01_mas4x58p11d.fastq.gz pass pass pass 43.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3126067.0 pass HMN35AFXX_n01_mas4x58p12f pass pass 68.70662956305712 fail pass pass warn fail HMN35AFXX_n01_mas4x58p12f.fastq.gz pass pass pass 42.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3344006.0 pass HMN35AFXX_n01_mas4x58p13d pass pass 51.049291170486775 fail pass pass warn fail HMN35AFXX_n01_mas4x58p13d.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 10152521.0 pass HMN35AFXX_n01_mas4x58p13g pass pass 71.45259080618857 fail pass pass pass fail HMN35AFXX_n01_mas4x58p13g.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 2720952.0 pass HMN35AFXX_n01_mas4x58p14h pass pass 70.34119754951338 fail pass pass pass fail HMN35AFXX_n01_mas4x58p14h.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 2922264.0 pass HMN35AFXX_n01_mas4x58p15g pass pass 72.40373394867198 fail pass pass pass fail HMN35AFXX_n01_mas4x58p15g.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 2931497.0 pass HMN35AFXX_n01_mas4x58p17c pass pass 66.59419440390617 fail pass pass warn fail HMN35AFXX_n01_mas4x58p17c.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3488574.0 pass HMN35AFXX_n01_mas4x58p17h pass pass 66.07047060915698 fail pass pass warn fail HMN35AFXX_n01_mas4x58p17h.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3776884.0 pass HMN35AFXX_n01_mas4x58p18e pass pass 67.5162937639065 fail pass pass warn fail HMN35AFXX_n01_mas4x58p18e.fastq.gz pass pass pass 42.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 4015086.0 pass HMN35AFXX_n01_mas4x58p210c pass pass 71.4346075612531 fail pass pass pass fail HMN35AFXX_n01_mas4x58p210c.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 2125713.0 pass HMN35AFXX_n01_mas4x58p212g pass pass 67.91632459218 fail pass pass warn fail HMN35AFXX_n01_mas4x58p212g.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3459353.0 pass HMN35AFXX_n01_mas4x58p21b pass pass 65.16444609463014 fail pass pass warn fail HMN35AFXX_n01_mas4x58p21b.fastq.gz pass pass pass 42.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 4324361.0 pass HMN35AFXX_n01_mas4x58p22e pass pass 66.86560507750197 fail pass pass warn fail HMN35AFXX_n01_mas4x58p22e.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 4002460.0 pass HMN35AFXX_n01_mas4x58p23c pass pass 71.29892305228934 fail pass pass pass fail HMN35AFXX_n01_mas4x58p23c.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 2763799.0 pass HMN35AFXX_n01_mas4x58p25e pass pass 69.70544231092187 fail pass pass warn fail HMN35AFXX_n01_mas4x58p25e.fastq.gz pass pass pass 42.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 2910599.0 pass HMN35AFXX_n01_mas4x58p27g pass pass 64.62381489297196 fail pass pass warn fail HMN35AFXX_n01_mas4x58p27g.fastq.gz pass pass pass 42.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 4582050.0 pass HMN35AFXX_n01_mas4x58p28c pass pass 65.16315755881278 fail pass pass warn fail HMN35AFXX_n01_mas4x58p28c.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 4622844.0 pass HMN35AFXX_n01_mata1 pass pass 68.41744907678769 fail pass pass warn fail HMN35AFXX_n01_mata1.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3470780.0 pass HMN35AFXX_n01_mata2 pass pass 64.25320775931559 fail pass pass warn fail HMN35AFXX_n01_mata2.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 4671619.0 pass HMN35AFXX_n01_matalpha1 pass pass 66.20975175695123 fail pass pass warn fail HMN35AFXX_n01_matalpha1.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 4290050.0 pass HMN35AFXX_n01_matalpha2 pass pass 55.2602419423686 fail pass pass warn fail HMN35AFXX_n01_matalpha2.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 7529185.0 pass HMN35AFXX_n02_mah137 pass pass 77.28096303328155 fail pass pass pass fail HMN35AFXX_n02_mah137.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 2544403.0 pass HMN35AFXX_n02_mah148 pass pass 73.13995317677676 fail pass pass pass fail HMN35AFXX_n02_mah148.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3237213.0 pass HMN35AFXX_n02_mah33 pass pass 73.32110259351975 fail pass pass pass fail HMN35AFXX_n02_mah33.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3125315.0 pass HMN35AFXX_n02_mah4 pass pass 72.43996877627877 fail pass pass pass fail HMN35AFXX_n02_mah4.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3453253.0 pass HMN35AFXX_n02_mah58 pass pass 70.18131609136856 fail pass pass pass fail HMN35AFXX_n02_mah58.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3408567.0 pass HMN35AFXX_n02_mas4x58p110b pass pass 53.53784720341205 fail pass pass warn fail HMN35AFXX_n02_mas4x58p110b.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 7572942.0 pass HMN35AFXX_n02_mas4x58p111d pass pass 61.03252132549626 fail pass pass warn fail HMN35AFXX_n02_mas4x58p111d.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 6386017.0 pass HMN35AFXX_n02_mas4x58p112c pass pass 70.04160252943714 fail pass pass pass fail HMN35AFXX_n02_mas4x58p112c.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3235958.0 pass HMN35AFXX_n02_mas4x58p11d pass pass 74.02157571030381 fail pass pass pass fail HMN35AFXX_n02_mas4x58p11d.fastq.gz pass pass pass 42.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3126067.0 pass HMN35AFXX_n02_mas4x58p12f pass pass 68.75016723954435 fail pass pass warn fail HMN35AFXX_n02_mas4x58p12f.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3344006.0 pass HMN35AFXX_n02_mas4x58p13d pass pass 53.225610363730155 fail pass pass warn fail HMN35AFXX_n02_mas4x58p13d.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 10152521.0 pass HMN35AFXX_n02_mas4x58p13g pass pass 72.51125257665659 fail pass pass pass fail HMN35AFXX_n02_mas4x58p13g.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 2720952.0 pass HMN35AFXX_n02_mas4x58p14h pass pass 71.05464459439801 fail pass pass pass fail HMN35AFXX_n02_mas4x58p14h.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 2922264.0 pass HMN35AFXX_n02_mas4x58p15g pass pass 73.59861411644602 fail pass pass pass fail HMN35AFXX_n02_mas4x58p15g.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 2931497.0 pass HMN35AFXX_n02_mas4x58p17c pass pass 68.04556901848132 fail pass pass warn fail HMN35AFXX_n02_mas4x58p17c.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3488574.0 pass HMN35AFXX_n02_mas4x58p17h pass pass 68.2658018817254 fail pass pass warn warn HMN35AFXX_n02_mas4x58p17h.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3776884.0 pass HMN35AFXX_n02_mas4x58p18e pass pass 68.00877776909296 fail pass pass warn fail HMN35AFXX_n02_mas4x58p18e.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 4015086.0 pass HMN35AFXX_n02_mas4x58p210c pass pass 72.95002418891008 fail pass pass pass fail HMN35AFXX_n02_mas4x58p210c.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 2125713.0 pass HMN35AFXX_n02_mas4x58p212g pass pass 68.87118412780715 fail pass pass warn fail HMN35AFXX_n02_mas4x58p212g.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3459353.0 pass HMN35AFXX_n02_mas4x58p21b pass pass 65.7297124081109 fail pass pass warn fail HMN35AFXX_n02_mas4x58p21b.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 4324361.0 pass HMN35AFXX_n02_mas4x58p22e pass pass 68.06056877854272 fail pass pass warn fail HMN35AFXX_n02_mas4x58p22e.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 4002460.0 pass HMN35AFXX_n02_mas4x58p23c pass pass 71.94932672246411 fail pass pass pass fail HMN35AFXX_n02_mas4x58p23c.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 2763799.0 pass HMN35AFXX_n02_mas4x58p25e pass pass 70.67704314735191 fail pass pass pass fail HMN35AFXX_n02_mas4x58p25e.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 2910599.0 pass HMN35AFXX_n02_mas4x58p27g pass pass 65.90998184809932 fail pass pass warn fail HMN35AFXX_n02_mas4x58p27g.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 4582050.0 pass HMN35AFXX_n02_mas4x58p28c pass pass 65.51423949247454 fail pass pass warn fail HMN35AFXX_n02_mas4x58p28c.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 4622844.0 pass HMN35AFXX_n02_mata1 pass pass 69.32051132762511 fail pass pass warn fail HMN35AFXX_n02_mata1.fastq.gz pass pass pass 41.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 3470780.0 pass HMN35AFXX_n02_mata2 pass pass 65.03926415007804 fail pass pass warn fail HMN35AFXX_n02_mata2.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 4671619.0 pass HMN35AFXX_n02_matalpha1 pass pass 66.63970282851905 fail pass pass warn fail HMN35AFXX_n02_matalpha1.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 4290050.0 pass HMN35AFXX_n02_matalpha2 pass pass 56.98437487224006 fail pass pass warn fail HMN35AFXX_n02_matalpha2.fastq.gz pass pass pass 40.0 150.0 Conventional base calls Sanger / Illumina 1.9 0.0 fail 150.0 7529185.0 pass