HMN22BGX7_n01_28_col_input_h3k29ac_4K_R2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMN22BGX7_n01_28_col_input_h3k29ac_4K_R2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10063913
Sequences flagged as poor quality	0
Sequence length	76
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	221926	2.205166121765957	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	212537	2.1118723899938323	No Hit
AGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	111168	1.1046200419260381	No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCGGCAATCTCGTATGC	40604	0.40346135742628136	TruSeq Adapter, Index 10 (97% over 36bp)
TTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	37657	0.37417851287068954	No Hit
ATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	23143	0.2299602550220774	No Hit
CGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	17590	0.17478290998739754	No Hit
AAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	10986	0.10916231092220294	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGGGGGG	16965	49.44321	1
CGTATGC	7675	45.964447	44
GTATGCC	7980	45.918533	45
TATGCCG	7995	44.60668	46
TCGTATG	8240	43.407383	43
ATGCCGT	7305	43.262512	47
CTCGTAT	8330	43.14825	42
TGGGGGG	40995	39.86334	1
GCAATCT	12835	38.256947	37
GGCAATC	17390	36.246395	36
CGGCAAT	21935	36.203247	35
ATCTCGT	11620	35.359154	40
TCTCGTA	10475	34.74715	41
AATCTCG	12920	34.34762	39
TGCCGTC	8095	34.198414	48
GCCGTCT	7325	32.53779	49
TCGGCAA	25340	31.725252	34
CTCGGCA	26000	31.17583	33
ACTCGGC	26200	30.858006	32
TGAAAAA	14845	30.511158	62