FastQCFastQC Report
Tue 28 Jan 2025
HMMLLDRX5_n02_H3K4me3_plusIFN_rep3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMMLLDRX5_n02_H3K4me3_plusIFN_rep3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39093835
Sequences flagged as poor quality0
Sequence length66
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATAGACAGCTGCTGAACCAATGGGACCAAGCTTCACACCGAGTTCATCGCTTATGTGTTCGACCC855530.2188401316985146No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)