FastQCFastQC Report
Tue 28 Jan 2025
HMMLLDRX5_n01_H3K27ac_plusIFN_rep1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMMLLDRX5_n01_H3K27ac_plusIFN_rep1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63464793
Sequences flagged as poor quality0
Sequence length66
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCAAAAGATCTCGTATGCCGTCTTCTGCTTGAAA692560.10912507033624139RNA PCR Primer, Index 28 (100% over 43bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)