HMM52AFXY_n02_776-2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMM52AFXY_n02_776-2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8338158
Sequences flagged as poor quality	0
Sequence length	76
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	121789	1.4606223580795663	No Hit
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCC	71119	0.8529341852241227	Illumina Single End PCR Primer 1 (100% over 50bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGGGGG	12290	46.13867	67
AAAGGGG	12415	45.787247	66
CGCCGTA	13690	45.60032	47
CCGTATC	13940	44.68802	49
GCCGTAT	14265	43.591057	48
TCGCCGT	14215	43.497425	46
GGTCGCC	14450	43.127506	44
GTCGCCG	14445	43.119762	45
CGTATCA	14785	42.230694	50
GTGGTCG	15150	41.20015	42
CTCGGTG	14875	40.94551	38
AGGGGGG	14085	40.73095	68
ATCTCGG	15115	40.156498	36
TCTCGGT	15215	39.938316	37
GATCTCG	15330	39.276653	35
TGGTCGC	15850	39.205166	43
TCGGTGG	16330	37.87592	39
GGTGGTC	16440	37.83756	41
AGATCTC	16260	37.589634	34
GTATCAT	16560	37.199154	51