FastQCFastQC Report
Mon 29 Oct 2018
HMLHWBGX7_n02_HK_S27.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMLHWBGX7_n02_HK_S27.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGGACAACTAAGTCATTCATGAATAGGGTCCTATAAGTGGTCGGATCAA110.0No Hit
GAGTATATCGAGTTATAGCTTAAAATATTATTCAATTTTAAAAATTGAGT110.0No Hit
AGTATGGAATATGATGCCGTTGCAACTACACACTCCTGGATTCCCAAAAG110.0No Hit
TTGCAATATTAAGCCTTACACCAGCCAAATACAGTCAAAGAACAAAACGT110.0No Hit
GTGATCGTTGATGAATGAAGGCATAGATTGAAGAAATAAAAGAGTCCAAG110.0No Hit
AATGATAACACAGTTCGAGTCTCTAAAAATCTACAGAGATTCGCTTGGAG110.0No Hit
GCTTGCATTAATGTGATGGGTTCAAAGCTAGTTTCATTTGGGTTTAAGAT110.0No Hit
GAAAACTCGCATTATCGATATGGATTTCACACCACAGGCGGAGACAAGGT110.0No Hit
ACTCTATTCTTCCCCAATGAAGGTATTCAACATAAACAACCGTCATAAAT110.0No Hit
AGTCACTGTAGTATGGTCCTAGTATCCATACTTTGGGAATTCCGGTAAGT110.0No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)