FastQCFastQC Report
Fri 21 Sep 2018
HMLHWBGX7_n02_HK31.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMLHWBGX7_n02_HK31.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTAGTCAAATTTTTTGCTTTTTTTATTGTATACTTTTTCTATTGGGCT14.761904761904762No Hit
ACCATGCCTGGCAAATGGGCTGCGCCCCCAGCACCTGCGATGATGACCTT14.761904761904762No Hit
GGAAAGGGAGAGAAGAGTCAACTGGGTCAGTATATAGACTCTGGCTTATT14.761904761904762No Hit
GCATTATCTCTTTTCAACAGTATTAACAACTATGATTACTGTACATTCTT14.761904761904762No Hit
ATACTTTAAGCAGGCCCTAATTCATTCTAATTAAATAGTGTAAAAACTGA14.761904761904762No Hit
GGTCAACCAATTCAATCTACTAAAGAAACTGTTTTTAGATCTCCTTATGC14.761904761904762No Hit
GGTCTTTTTGTACGAAACAAGGATTTGCAAAAAAGGCTCCTTTTTTGTGG14.761904761904762No Hit
AGATTAGCCTTTGTAATTGTAAACGTGAGCTACTAAGTCTAATACTTTGT14.761904761904762No Hit
ACAAAACCCACTGTCATCATTACTAAATCAACAATGCTTATTCCGCTTGT14.761904761904762No Hit
GGATATGCAGCCGACCTGAAGAGCACACAGAATGCCATTGACGAGATTAC14.761904761904762No Hit
GAAGAGAAGAAATGACTGCAGTAGCCTTATCAGACCCTGTGGGAAAGGCC14.761904761904762No Hit
CTATCCAGACTGAATCAGTTAGCTCACAGGCCTTGTTGAACTCATTCTGT14.761904761904762No Hit
ATTGATGGCCATCCTAATTCTTTTGGTCGCTGTCTGGCGGTCAGGAAGTA14.761904761904762No Hit
AAAAACAAAATCCTGTAAAAAAACACAAAAAAAACAAAATCAATTACTCA14.761904761904762No Hit
CAACAAGGGACCTGACCATGAGAAGGTGTATTGATCAGTGTACAATGGCC14.761904761904762No Hit
GTCACACACTCTCGTATAGTAGTGTTATCCCCTATATGAGTAGTAGTTTC14.761904761904762No Hit
TCCCTAAGGGGAAGAGGCAATACTCTCGGTCTAGACATCAAAGAAGCCAC14.761904761904762No Hit
TATATTACATCAAATCACGCGACTATAAGAAAAAACCATGCATCAGCCAT14.761904761904762No Hit
ATCTTTGGCCATGTTTGAGATGGTTTTCTCAATGCTAACTAATTTACGTC14.761904761904762No Hit
CTGTCAGATTTATGGCTGATAAAGGAATGTTTCCACACAATTTGTCCTGT14.761904761904762No Hit
GCTTTATTTTTCATTCAACTTAATCAGGATAGCATAACAGTTTCTGTATT14.761904761904762No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)