FastQCFastQC Report
Fri 21 Sep 2018
HMLHWBGX7_n02_HK29.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMLHWBGX7_n02_HK29.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCAAAAGCAGGTAGATATTTAAAGATGAGCCTTCTAACCGAGGTCGAA19.090909090909092No Hit
ATTCACAAAAAATAGAAAAAACAATAGGACAATAAAATAGAACTAATTAA19.090909090909092No Hit
AAGGTGAGTTGCACTAATGACATACTGTGACCTTTTTTGCTGAATTCACT19.090909090909092No Hit
GGGGAAGGGAGCAAGGCGAGGGGGAGGGGAGAGATGGAGGAGGAGAGGGT19.090909090909092No Hit
ATCATGAAGCTCACTAGAACACAGAAGCTTGCGGCCGCACTGACCCCTAA19.090909090909092No Hit
TTATTGAGCTTTTCCCACTTCGTATTTTGAAGTAACACCTAGGAGCAATT19.090909090909092No Hit
ACACATAATAGGCGCTCAAAAACATGAGTTCCCTTCCTTCCTTTGCTCCT19.090909090909092No Hit
TGCATATACTCTCCTATCCTCAATACCTCCCTTCACAACCCATTATTCTG19.090909090909092No Hit
CGCTTGAACCCGACGTTCTAGACACGGGCTTTGGAAGCCTACACTTTGCC19.090909090909092No Hit
AGGTAATTGCTAGGCAAGCAAAATGCCGTTGCGTGATGTAATACTGGCAG19.090909090909092No Hit
GAGGTACTAGCTATATTTTGTCTTCACCAAAGGCCAGAAGAGAGAGAGCG19.090909090909092No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)