FastQCFastQC Report
Fri 21 Sep 2018
HMLHWBGX7_n02_HK01.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMLHWBGX7_n02_HK01.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGGTTCCCTTTCCTCCCATTAAGGATGCTCCACCAATGATGCAGGCTGC12.0408163265306123No Hit
GAACAGCTTTGATGACCGGCCTTAAGGCTTCGTTCAATGCCTGGTAATTC12.0408163265306123No Hit
CAAAGCAGCACACTCATGATGCTGGGCAATTGCATGTTGCCGGCCGACTT12.0408163265306123No Hit
TTATAATATTGTAGAAGGCTCTCTGTATCATACTTATAGATAAGCTCATA12.0408163265306123No Hit
GCGGTATTCCGTATGGCATTTAAAATGCACAATACGACGAATTACGTCAT12.0408163265306123No Hit
AATCAATTCTATCTATTTAAACGAAAAGGCGGAGCAGAAGATGGGCTATT12.0408163265306123No Hit
ATACAGGACCTGGAACTGGATATCAAATTTCTGCTGAAAGATGGGCTGAA12.0408163265306123No Hit
TACTATCACAGAAAGTAAAAAGAATTTTAATGAAAGTGGTGAAGCAACTT12.0408163265306123No Hit
ACGTCGGGCAGTTCGTCGATTTTGATGATGGAAACGCCGTTTGCCTGCGT12.0408163265306123No Hit
GGTATTATGGGATATGGATGCAGTTATTCAACGATATTGCATTCACATTG12.0408163265306123No Hit
GCTTCATATAGCCCCCCAAGATCAAAGGTCCCAGGTTCGAGGTTGTCCCT12.0408163265306123No Hit
CTTATTGTAACGAACGAAACATCACTTCGTCCACTGCCCGTTGGTTTGCA12.0408163265306123No Hit
ATGCCATACGAAGAGGGCGACTTAAAACGAATTTATCGCTGGTATGAACT12.0408163265306123No Hit
GGATAGGGATTTGCCTAGAATGGTGTACCAAGCGATGCTTTTTATGGGAT12.0408163265306123No Hit
TTTATATACCGCTTTCTGACACGCCTGCTGAGGCTTCGGAAGGAAAGAAA12.0408163265306123No Hit
CTCTCCAGTCTCTCTCATGTCTTCACCCGCCCTCAGCGACTCTCCTGTCT12.0408163265306123No Hit
GTTTGTATCTTTTGACCTTCAGAGCCTTCAGGATATTCTTTTTTGTTCAG12.0408163265306123No Hit
CTTCAAATTCCGCCCGTTTGGTTTCATCCTTCAGCCAACCGATGGGAAAG12.0408163265306123No Hit
CGCTAAGGACGACGCCTACATTGTTAGCGGCTATTTCTATGTCCCCTCCG12.0408163265306123No Hit
CCTTAAGGCCGGTCATCAAAGCTGTTCCCAACCGCCTGCACCACCTTTAC12.0408163265306123No Hit
GTTATAGAGTTACAAAGAACTGGTAGATGCTTTCTACCACCTTATCGGGA12.0408163265306123No Hit
TTCTTTGACATTCAACACTACTTAAATTCTCTCAGCTTCTGGAGTCACTT12.0408163265306123No Hit
ATGTTAAACCGTATAAGGATAGCAGAAGAAAAAGGAGTTCCTATAACAAA12.0408163265306123No Hit
GGGATAACAAGCAAGTCCCCTCCGTCATCCCTGCTGATTAGTCTCCACAA12.0408163265306123No Hit
GTCCTAGCTCTTGTGTTCCTTTTGTTGACACCGGGTTTGTGTATTCTGGT12.0408163265306123No Hit
GGATATGAGTTTGATTTCACAGGGACAAATGTAACACCAACAAATCTTGC12.0408163265306123No Hit
TTATCGAGCCATGCAAAAAAAAATAAAGGAATTTTTTTGTTCATCAGTTC12.0408163265306123No Hit
ACAAAAGATCAATGAAACAAAAATTTGTATTTTGTAAAAGATGAACAAAA12.0408163265306123No Hit
TTGGATAACAGAACCTTGGTATTCTTCTGGAGTGTCGATTTGAACACGTT12.0408163265306123No Hit
TCTCAGGATATACCACTTTTGGGACGAGTGTAAGCCTACAAACCATACTC12.0408163265306123No Hit
GTTTCAAGGCATGAATTCTCAAATATTCCTGGGTGGGATTCTTCAAGGAA12.0408163265306123No Hit
GTCGTGCAGCCATCACCTCTGTCTAGTTCCAAAGCCTTCCACCATGCAGA12.0408163265306123No Hit
TAGTAACTTAGAAACGCTGACATTCATCGGTATGGGGTTATCAGTATTGG12.0408163265306123No Hit
GTATGCGGACAAAACCATATGCCGTCGATGGTACCGCCTGCTTGAACGGC12.0408163265306123No Hit
ATTACCGTGTCTATCAGGCTACAAACTCCATGCTTAGCTATTTCATTGAT12.0408163265306123No Hit
GCTACACAAAAACCAAAAGCCTCTTGGACAACTATGCAATTTGTTGCTAA12.0408163265306123No Hit
TTTAGAATCAGAGCTTCAAAGTCCTTGATAGAGGTAAATTTTATAAAGTA12.0408163265306123No Hit
CATTATCATAGAGATGTTCTTAAAGCCATGAAACTGAAATAGGATCACTA12.0408163265306123No Hit
ACTCAGTTTAATGATTTTACCCTGAGTGTGAAGCAGAGATTATTAAATAA12.0408163265306123No Hit
TCATTTTCCTATAAAAACAACTGTGAAAGGAAAATATGTCTGAACATTCT12.0408163265306123No Hit
AGTTGGTGAATCAGCAATCCAAGAAAATACTCCAGAATATACTAAGCCCG12.0408163265306123No Hit
AGTTATAGGAGAAGGAGAAATAGATGAAGCTCCTATGCTATATATTGGAG12.0408163265306123No Hit
TATGAGCGCATGGTTACGCGCAACATACCTTGCGGCGTTTCGACGCCGCC12.0408163265306123No Hit
ATTTCAGACGGCCCTTTTTGTCAACCAAAACACTACTTTACATTCTATCT12.0408163265306123No Hit
CCATATCTCACAGGGGGCACCCCCCAACTACTTCCGGCGTTCTAGGGCTT12.0408163265306123No Hit
AGTATTCCTGTAATCATTCCGGCAACAGCTTTTCCCCTCATTCCACCCTT12.0408163265306123No Hit
ATAGAGCAGTTCCTTGACGACGGTCTTCCCGTTGCTCCCCGTGATACCGA12.0408163265306123No Hit
CCTGGTATTCGTGTGGCTCCCATTCATGATACCCGTAAGGAAGAATACAC12.0408163265306123No Hit
GCAAATACGAATAATGTACTGACTACCAAAACTATCACCAAAAGTTATGA12.0408163265306123No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)