HMLHWBGX7_n01_HK_S48.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMLHWBGX7_n01_HK_S48.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	53201
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACTCTATGCTGACAAAATGACTGTCGTCAGCATCCACAGCATTCTGCTGT	123	0.23119866167929173	No Hit
TTCCTATACAGTTTAACTGCTTTGTCCATGTTATTTGGGTCTCCATTCCC	98	0.18420706377699667	No Hit
CTCCAACTCTATGCTGACAAAATGACTGTCGTCAGCATCCACAGCATTCT	96	0.18044773594481306	No Hit
TTCCAACACTGTGTCAAGTTTCCAGGTAGATTGCTTTCTTTGGCATATCC	92	0.17292908028044587	No Hit
TTCTAACCGAGGTCGAAACGTATGTTCTCTCTATCGTTCCATCAGGCCCC	87	0.16353076069998684	No Hit
ATTGTATATGAGGCCCATGCAACTGGCAAGTGCACCAGCAGAATAACTGA	74	0.13909512979079341	No Hit
CTCCTGTTCCACTTCAAACAGCAGTTGTAATGCTTGCATGAATGTTATTT	65	0.12217815454596719	No Hit
TTCCCATTGAGGGCATTTTGGACAAAGCGTCTACGCTGCAGTCCTCGCTC	63	0.11841882671378358	No Hit
GTATAGGAAACTTAAGAGAGAGATAACGTTCCATGGGGCCAAAGAAATAG	63	0.11841882671378358	No Hit
CTCATGGAATGGCTAAAGACAAGACCAATTCTGTCACCTCTGACTAAGGG	63	0.11841882671378358	No Hit
TCCTAGTTCCAGTACTGGTTTAAGAGATGATCTTCTTGAAAATTTGCAGA	59	0.11090017104941635	No Hit
TAGTAATACTATGGTCTCTAGTCGGTCAAAAATCACACTGAAATTCGCTT	57	0.10714084321723277	No Hit
CTATTGAGGATGTCAAAAATGCAATTGGGGTCCTCATCGGAGGACTTGAA	57	0.10714084321723277	No Hit
TTCCAGTACTGGTTTAAGAGATGATCTTCTTGAAAATTTGCAGACCTATC	57	0.10714084321723277	No Hit
GGTATGTGCAACATGTGAGCAGATTGCTGACTCCCAGCACAGGTCTCATA	56	0.10526117930114096	No Hit
CTTTTAAGGCCGTGTTTGAAGAGTCGATAGACGCATTTGAAAAAAAGACG	55	0.10338151538504915	No Hit
GGTTTAAGAGATGATCTTCTTGAAAATTTGCAGACCTATCAGAAACGAAT	54	0.10150185146895735	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGAAA	20	3.8319628E-4	108.848076	1
CGAAAGC	25	9.3041954E-4	87.07846	3
AGTAGAA	40	6.575924E-5	72.565384	1
TCTATGC	55	3.9875904E-6	65.96853	3
CTATGCT	55	3.9875904E-6	65.96853	4
GCAAAAG	45	1.1782589E-4	64.50256	3
AGGGTGT	35	0.003535309	62.1989	6
GCAGGGT	35	0.003548521	62.14044	8
TATGCTG	65	1.0737942E-5	55.819523	5
GCGAAAG	40	0.0059981085	54.424038	2
AAGGGTG	40	0.0059981085	54.424038	5
TAGAAAC	60	4.8809114E-4	48.376923	3
ACATGGG	60	4.8809114E-4	48.376923	6
AATCAAA	45	0.009555292	48.376923	1
ACAAGGG	45	0.009555292	48.376923	3
CTCTATG	80	3.6672664E-5	45.353363	2
CATGGGT	65	7.27528E-4	44.613647	7
TTCCAAC	100	2.668763E-6	43.53923	1
GCTGACA	85	5.274551E-5	42.6454	8
TCCAACA	105	3.7328355E-6	41.46593	2