HMLHWBGX7_n01_HK_S41.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMLHWBGX7_n01_HK_S41.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7348140
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGCAAAAGCAGGCTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTTCCG	14981	0.20387472203850227	No Hit
TACTAGGGACGGCCCTTCTCAAATTTCCTGCGCGCACAGAGGATAGGGAC	11148	0.1517118617772661	No Hit
GTATTTAAATGGTCTGTTTGGTAGCGAACAAGGCAAGAGATTCGTTAAAT	10664	0.14512516092507763	No Hit
GAGCAAAAGCAGGCAGCGGAAGGTATTGGATGTGTTCAAAAGATACCAAG	9560	0.13010095071678002	No Hit
GTATTGGATGTGTTCAAAAGATACCAAGAAGAATATGACAGGTATTTAAA	9176	0.12487513847041563	No Hit
GAGCAAAAGCAGGAACTAGTGATCCGGCCATGGCACGTGGGTGCGTGGTC	9052	0.12318763659919382	No Hit
GAGCAAAAGCAGGGATAACAAGCAAGTCCCCTCCGTCATCCCTGCTGATT	8778	0.1194588018192359	No Hit
TCGTAAAGGTGGTGCAGGCGGTTGGGAACAGCTTTGATGACCGGCCTTAA	8550	0.11635597579795703	No Hit
TTGTAGTAGTGGGTGGCAACCTGGTATTCGTGTGGCTCCCATTCATGATA	8432	0.11475012724308466	No Hit
CTCCAAGCCCGCGTAGCCGTGCAGTACGTCGAATTTTGCGCACAGGTAAT	8313	0.11313066980215403	No Hit
GTAGTAGTGGGTGGCAACCTGGTATTCGTGTGGCTCCCATTCATGATACC	7597	0.10338670738445377	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGCAAA	25310	78.010925	1
GCAAAAG	27145	72.7092	3
AGCAAAA	27570	71.24501	2
CAAAAGC	32420	60.87881	4
GCGAAAG	11800	58.313137	2
AAGCAGG	40895	57.440548	7
AGCAGGC	16290	50.15908	8
AAAGCAG	51475	48.133297	6
GCAGGCT	8335	46.97315	9
CGAAAGC	15635	44.289066	3
AAAAGCA	45635	44.2505	5
AGCAGGG	17570	38.994804	8
GCAGGGA	10680	38.01704	9
GAAAGCA	20300	34.71853	4
AGCGAAA	20100	33.62171	1
GAGCGAA	14610	33.302147	1
AGCAGGT	16020	27.87821	8
GTTAGGT	1690	26.599073	9
AGCAGGA	16880	26.114267	8
TGCGTAC	1970	24.660374	4