FastQCFastQC Report
Mon 29 Oct 2018
HMLHWBGX7_n01_HK_S29.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMLHWBGX7_n01_HK_S29.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCCTTCCTTCTTTCGGTTGGGATTTTTGGTTCTGTGATCGTCTCAGTT19.090909090909092No Hit
CTCCTCCCTTCACCTGCCTCTGAGATTTCTTTATGTTTAATCATCATGGA19.090909090909092No Hit
TGTTATCACTACCCTGCTACAGCAAAGCCTTTTAAAGCCTATCTACACTC19.090909090909092No Hit
GCCATAACTATTTTAATGCATGTGTCAGGAAGGAGTTGAACCAGGACGCA19.090909090909092No Hit
AGCACGTGTGTTTTTATGAGAATTATGCTGAGATAGGTAACAGATGAGGA19.090909090909092No Hit
GTCCTGTAGCACAGGGGTCAAGGAATGTTACCTAAACCACATTCGAGCAA19.090909090909092No Hit
AAATTGTACATTTGGGGGGTTCCCCACCCGGGTACGGACAAAGACCAAAT19.090909090909092No Hit
CCCCTTAGTAATAGGTGACAGAATTGGTCATGTCTTTAGACATTCCATGA19.090909090909092No Hit
TTACAATGGTCTTCCCTTTGCATTAAGTAGCCAGATGATATTGAGAAAAT19.090909090909092No Hit
CACATTTGTGGTATATTTTGAAACAACCATTGCCCATATCCTCAGCATTT19.090909090909092No Hit
ATTTATCAGCATCCTAAGAGGTAGGCAGTGCAACAATTTTTAGAGCCATT19.090909090909092No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)