FastQCFastQC Report
Mon 29 Oct 2018
HMLHWBGX7_n01_HK_S27.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMLHWBGX7_n01_HK_S27.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATTCTGCTAGGGATATTCCTTACTCTGGGTCTAGATCCGATATTCGGG110.0No Hit
GAAAAATTAATAAAAATATAAATACAACGATGTTACGTTATATAAGCACT110.0No Hit
ACATAATATTGAGTAGTTAAAAAATGCAATTGTTGTAATAAGCGTAGGAA110.0No Hit
CTATTGGACAATAGTAAAACCGGGAGACATACTTTTGATTAACAGCACAG110.0No Hit
GAGCAAAAGCAGGAGGAAAGATGAATCCAAATCAAAAGATAATAACGATT110.0No Hit
TCTTTACAGTTATCTGGAGCTTTCTTGCTGCTGTAGTTTTTTCTCTTCTG110.0No Hit
GACCTTTCTCTAGCTTAGACGGCGTTGCATATTGACCTTGGGCTGTGCCT110.0No Hit
ATTAAAGGGAACCGCTTGGTGTTGACGCGCAGCTCATGGTGATCGTTCAC110.0No Hit
CAGAGGACTCTTCCTTCTTAATCCTTCCAGACTCGAAGTCAATTCTGGCA110.0No Hit
TGTAATGCTTGCATGAATGTTATTTGTTCAAAGCTATTTTCAGTTGTTTT110.0No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)