HMLHWBGX7_n01_HK_S17.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMLHWBGX7_n01_HK_S17.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6924121
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGCAAAAGCAGGGTGACAAAAACATAATGGACTCCAACACCATGTCAAG	16437	0.2373875326557696	No Hit
AAACAAGGGTGTTTTTTATCATTAAATAAGCTGAAACGAGAAAGCTCTTA	10418	0.15045953125313669	No Hit
CTTATGAGGATGTCAAAAATGCAGTTGGGGTCCTCATCGGAGGACTTGAA	9965	0.14391718457837463	No Hit
GTACTATGTTCTTTTCCATGATCGCCTGGTCCAATCGCACGCAAAGAGGG	8591	0.12407351055823547	No Hit
GAGCAAAAGCAGGTAGATATTTAAAGATGAGTCTTCTAACCGAGGTCGAA	8082	0.11672239696562206	No Hit
CCTCATAAGTATGTCCTGGAAGAGAAGGTAATGGTGAAATTTCTCCAACT	7659	0.11061331828256611	No Hit
CTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTTTGGCATATCC	7195	0.10391210667751184	No Hit
GTTGTAAGGCTTGCATAAATGTTATTTGTTCGAAACTATTCTCTGTCGCT	7000	0.10109586473142224	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAGCGAA	4290	87.72702	1
GAGCAAA	18385	77.66143	1
AGCGAAA	7130	64.78481	1
GCGAAAG	7205	64.712906	2
CGAAAGC	7580	61.70318	3
CAAAAGC	27585	51.496593	4
AGCAAAA	27500	50.99618	2
GCGAAGC	760	50.568413	3
AAGCAGG	34440	50.165215	7
GCAAAAG	29085	48.516647	3
AAAAGCA	33180	43.162617	5
AGCAGGG	22130	42.949677	8
AAAGCAG	41375	42.58781	6
GCAGGGT	11655	41.802464	9
GTAGAAA	10140	40.261852	1
TCGCTCC	2455	40.170242	5
TAGAAAC	10200	39.02888	2
CTTTCGC	2560	37.955853	2
GCTTTCG	2775	35.01589	1
GCAGGTA	5205	34.265675	9