FastQCFastQC Report
Fri 21 Sep 2018
HMLHWBGX7_n01_HK31.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMLHWBGX7_n01_HK31.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAAAAAGATTTGAACATACCAGATATTGTGACATTCAAAGAGTCATTGC14.761904761904762No Hit
GTAGTATCAACAGATTTCAACGGTGCTGTTGAAACTTCTGTATTTGATGC14.761904761904762No Hit
CTTTACCTACTGCTGTGAACTGTGTATTCATCTTTTCAATAACAGAATTT14.761904761904762No Hit
GGATTTCAATTTAAGAAGTGCATTAGAGATATTAAGGATGATATGACAGC14.761904761904762No Hit
GTTCTCTGGTGTGCAGGAGACTTGATAGCACTCATCTAAGTAGTTCTTGT14.761904761904762No Hit
ATCAAATTCAAACCACGTCAGCTTCGCCTTGCCGTACTCAAGTACAGCCT14.761904761904762No Hit
GTAATACTATGGTCTCTAGTAGGTCAAAAATAACACTGAAATTCGCTTTC14.761904761904762No Hit
TTAATATACTTTGGATATTGTCCCTGTACCGGCCCAGAGTAGAGAAAATT14.761904761904762No Hit
GTATATGATACAACCTTTAGCTTACGTACACCCTGATGCTAAAATAGCAA14.761904761904762No Hit
ATGTAATGGGGCCACAGCCCCTGCCCTGCCTCTCTGCCATGCCGCGGGCA14.761904761904762No Hit
GAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGG14.761904761904762No Hit
AAGTAATCTTCAACTTTGAAAATTAACTGATAATGACTAGGCCAAATTTT14.761904761904762No Hit
CCACTAATCAGGCATGAAAACAGAATGGTGCTGGCGAGCACTACGGCAAA14.761904761904762No Hit
GAGCAAAAGCAGGAGAAGCGAATGTGTATCGTTTGGCAGAAGTTTCTGTA14.761904761904762No Hit
GTCGCAGTCTCGCACCCGCGAGATACTCAAAAAAACCACCGTGGACAATA14.761904761904762No Hit
GTCACTCCCACCTACTCCCCCACTGAAACTTCCACCTATCAATCTCTTCC14.761904761904762No Hit
AAAGAATGAAAAGGATCTTGAACAGATTTCTTTATAGAGTTAAAATTACG14.761904761904762No Hit
AGAGCAAGCATTATTACAGCTCTTAAATGTATTCAAGGATCGATTGCTCC14.761904761904762No Hit
GAGTGTGATGGCTTCCAAAATAAGAAATGGGACCTTTTTGTTGACAGCAG14.761904761904762No Hit
CTTCAGCACAGCAAAGGAAACAATAAACAGAGTGAAAAGACAACATACAG14.761904761904762No Hit
CTAAAACAACAATCAAAAAGAAAAAGAAGAAACAAACAGAAAAAATAAAC14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)