HMKHTBGXB_n01_ISO_525_Jun28.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HMKHTBGXB_n01_ISO_525_Jun28.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5122252
Sequences flagged as poor quality	0
Sequence length	151
%GC	25

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATTATATATGTTTTATATTCTGTTATATATAACTATTTGAAATTATATA	19096	0.3728047741501199	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	12229	0.23874264678895143	No Hit
TAATAATAATATTAGTAACAACACATCTCTTTACCAGCAACACTTGAGCA	8967	0.17505971982635762	No Hit
TAATATATATCATAAAAATGATATTTTATGTAAATTATGTTATGAAAGTA	6415	0.1252378836496135	No Hit
TAATATATATGTTTTATATTCTGTTATATATAACTATTTGAAATTATATA	5728	0.11182581411457305	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGACTC	65	1.0925343E-5	55.784306	1
CGACTCT	75	2.554622E-5	48.32516	2
GGTAGCC	85	5.3523916E-5	42.636517	145
AGCCGAA	70	0.001058336	41.418327	145
TTAGGGG	245	0.0	38.461002	3
GAGCCGC	105	0.0077206786	27.61222	145
TAGGGGG	690	0.0	25.211405	4
ACCGGAC	195	2.6211652E-4	22.302177	145
GCAGTGC	465	2.0736479E-10	20.263807	145
CAGTGCG	110	6.170376E-7	14.501625	140-144
TATAGGG	465	2.9767241E-5	14.029885	2
CCGAGAA	325	0.008010007	13.381307	145
CAACAGG	385	0.0016077054	13.17856	145
CCGGACA	300	7.230401E-4	12.080347	145
AGCGCAT	140	9.206184E-6	11.395403	105-109
GACGGCC	90	0.005163254	11.278447	130-134
CGCCGGA	185	1.4656507E-7	10.974203	140-144
GGACAAC	335	7.958981E-6	10.818221	145
CCCGCCG	340	0.0032229773	10.659129	145
CGGGAAC	145	1.6442192E-4	10.0011215	140-144