FastQCFastQC Report
Tue 13 Aug 2019
HMJY2BGX7_n01_dpErk_WE_514hpf_H1_4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJY2BGX7_n01_dpErk_WE_514hpf_H1_4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6977144
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGGACA13300.017.372871
GCCCGAA9300.016.2084521
CGATGCG12250.015.4488541
GGGATAG6200.015.4362273
CATGACG9100.015.35106858
GGGCTAC9700.015.31321
AATGGAA14150.015.2406521
TTGACCC15700.015.0675531
GAAGCCC14400.015.0524651
GAACGAG8350.015.0186883
GAGACCC12650.014.9603521
CTGGACG9750.014.6704231
AAACCCA12650.014.6124361
ATGGGAG11200.014.5394361
TCGGGAC9400.014.3973041
CCGGGTA10550.014.3923111
AACCTGA12200.014.3397361
GGAATGG14050.014.252761
GGAGAAC11900.014.2389391
TAACGAC13250.014.19986251
Produced by FastQC (version 0.11.5)