FastQCFastQC Report
Tue 13 Aug 2019
HMJY2BGX7_n01_dpErk_WE_514hpf_H1_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJY2BGX7_n01_dpErk_WE_514hpf_H1_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8106082
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGGACA15450.017.5178151
GGGACCT10500.015.8219841
AATGGAA16950.015.253571
TTGACCC14250.015.2098421
AGGCTGC14850.014.9657411
TGCGACG14800.014.9419621
GGGCTAC12350.014.8772561
GTGGAGA14500.014.8717271
AAACGCT14100.014.8254471
CCCTGAT13150.014.8088321
GGCACGT14650.014.7945551
AGCGCCA18550.014.768241
CATGACG10950.014.7664938
GCCCGAA12450.014.7577591
GGGCCAT16200.014.669391
GGGATCC16050.014.669391
GAAAAGA5400.014.6667644
GTGCTGG11000.014.6027121
ACGCACG14650.014.5692571
ATGGGAG13750.014.5627031
Produced by FastQC (version 0.11.5)