FastQCFastQC Report
Tue 13 Aug 2019
HMJY2BGX7_n01_dpErk_WE_514hpf_F1_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMJY2BGX7_n01_dpErk_WE_514hpf_F1_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8605583
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGGACA16700.017.1952131
GCCCGAA10800.016.5034521
GGGACCT11200.016.0122781
GGGCTAC12450.015.2883391
GAGACCC16200.015.2130591
TAACGAC12250.015.1786851
GCGGAAA11350.015.1221071
GGGCCAT17100.014.991441
CTGGACG13750.014.963131
AATGGAA17900.014.87461951
AAACGCT14750.014.6945991
AAACGAA16250.014.6923041
TGGAACT16700.014.5599321
GAAGCCC17750.014.5044431
AGGGAAG8900.014.4606743
CTCGAGG17600.014.4405211
TACACCC18200.014.3876251
AGTAAAC14000.014.3782398
TCGGGAC12350.014.3430821
TATATCC18300.014.3090031
Produced by FastQC (version 0.11.5)